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SCN18_25_8_15_R2_B_scaffold_2414

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2414_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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41..493
DNA (453bp) protein (151aa)
transcription activator effector binding id=7716925 bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
transcription activator effector binding
Transcription activator effector binding {ECO:0000313|EMBL:ACU60344.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_25_8_15_R2_B_scaffold_2414_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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501..854
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTN5_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03671.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCN18_25_8_15_R2_B_scaffold_2414_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1097..1828
DNA (732bp) protein (244aa)
beta-galactosidase n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AD53
Beta-galactosidase {ECO:0000313|EMBL:KIA91038.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
beta-galactosidase
SCN18_25_8_15_R2_B_scaffold_2414_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1997..2884
DNA (888bp) protein (296aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9X7_NIAKG
ACP S-malonyltransferase
SCN18_25_8_15_R2_B_scaffold_2414_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3421..4563)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSW2_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17619.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_2414_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4572..5612)
DNA (1041bp) protein (347aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7Y258_9BACT
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EMS31296.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
MarR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2414_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5732..6271)
DNA (540bp) protein (180aa)
Dihydrofolate reductase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KKW5_SOLCM
dihydrofolate reductase
Dihydrofolate reductase {ECO:0000313|EMBL:AFD08598.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCN18_25_8_15_R2_B_scaffold_2414_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6375..9752)
DNA (3378bp) protein (1126aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E6D35
Uncharacterized protein {ECO:0000313|EMBL:AHF15575.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2414_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9724..10314)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSJ7_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF15574.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_2414_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10323..11741)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E5F85
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF15573.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_2414_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12152..12904
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBD4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM37033.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
Displaying 11 items

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