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SCN18_25_8_15_R2_B_scaffold_2436

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2436_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..483
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L2Q2_SIMNZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB87748.1}; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 / Z).;"
SCN18_25_8_15_R2_B_scaffold_2436_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

487..939
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBA2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81038.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2436_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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955..1155
DNA (201bp) protein (67aa)
Cytoplasmic membrane protein n=5 Tax=Leptospira interrogans RepID=G7QI15_LEPII
cytoplasmic membrane protein
Cytoplasmic membrane protein {ECO:0000313|EMBL:AAN48964.2}; TaxID=189518 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai; (strain 56601).;"
SCN18_25_8_15_R2_B_scaffold_2436_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1770..1910)
DNA (141bp) protein (47aa)
SCN18_25_8_15_R2_B_scaffold_2436_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2073..2531
DNA (459bp) protein (153aa)
Endoribonuclease L-PSP n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZUY0_9BACT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EON77838.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
endoribonuclease L-PSP
SCN18_25_8_15_R2_B_scaffold_2436_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2536..3519
DNA (984bp) protein (328aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NU95_9SPHI
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AHF16198.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_2436_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3528..4832
DNA (1305bp) protein (435aa)
Aminotransferase class-III n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUY7_DYAFD
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ACT93124.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCN18_25_8_15_R2_B_scaffold_2436_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4843..5823
DNA (981bp) protein (327aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Niabella soli DSM 19437 RepID=H1NU82_9SPHI
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AHF16187.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_2436_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5816..6904
DNA (1089bp) protein (363aa)
Peptidase M19 renal dipeptidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUY5_DYAFD
Peptidase M19 renal dipeptidase {ECO:0000313|EMBL:ACT93122.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
peptidase M19
SCN18_25_8_15_R2_B_scaffold_2436_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7105..8457
DNA (1353bp) protein (451aa)
Signal peptide n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUY4_DYAFD
signal peptide
Signal peptide {ECO:0000313|EMBL:ACT93121.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCN18_25_8_15_R2_B_scaffold_2436_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8506..9417
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035DE030
aldo/keto reductase
Tax=GWF2_Verrucomicrobia_62_7_curated
SCN18_25_8_15_R2_B_scaffold_2436_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9802..12897
DNA (3096bp) protein (1032aa)
TonB-dependent receptor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTJ2_PEDHD
TonB-dependent receptor {ECO:0000313|EMBL:ACU05770.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
TonB-dependent receptor
Displaying 12 items

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