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SCN18_25_8_15_R2_B_scaffold_2886

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2886_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..2357
DNA (2355bp) protein (785aa)
TonB-dependent receptor n=1 Tax=Bacteroides sp. CAG:530 RepID=R6DA00_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB57216.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_2886_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2393..3931
DNA (1539bp) protein (513aa)
RagB/SusD domain-containing protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7J7Z0_9PORP
RagB/SusD domain-containing protein {ECO:0000313|EMBL:CDE59713.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
RagB/SusD domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2886_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4089..5570
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7J720_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDE59714.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2886_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5639..6079)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F7A95
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01914.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_2886_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6243..6359)
DNA (117bp) protein (39aa)
SCN18_25_8_15_R2_B_scaffold_2886_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6606..7148)
DNA (543bp) protein (181aa)
SCN18_25_8_15_R2_B_scaffold_2886_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7172..7666)
DNA (495bp) protein (165aa)
SCN18_25_8_15_R2_B_scaffold_2886_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8528..9136)
DNA (609bp) protein (203aa)
SCN18_25_8_15_R2_B_scaffold_2886_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9608..10306
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D8A04
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF14111.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_2886_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10747..10890)
DNA (144bp) protein (48aa)
Displaying 10 items

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