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SCN18_25_8_15_R2_B_scaffold_4124

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4124_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..499
DNA (498bp) protein (166aa)
GTP-binding protein Der n=1 Tax=Segetibacter koreensis RepID=UPI00036E6C29
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
GTP-binding protein engA
SCN18_25_8_15_R2_B_scaffold_4124_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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949..4425
DNA (3477bp) protein (1159aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XU01_PEDHD
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:BAR48039.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
TonB-dependent receptor plug
SCN18_25_8_15_R2_B_scaffold_4124_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4446..6056
DNA (1611bp) protein (537aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UL01_TANFA
Uncharacterized protein {ECO:0000313|EMBL:BAR48038.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_4124_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6332..7333
DNA (1002bp) protein (334aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC91994.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCN18_25_8_15_R2_B_scaffold_4124_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8407..8856)
DNA (450bp) protein (150aa)
Response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UPH3_9FLAO
LytTR family two component system response regulatory protein {ECO:0000313|EMBL:KGO89360.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
LytTR family two component system response regulatory protein
Displaying 5 items

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