ggKbase home page

SCN18_25_8_15_R2_B_scaffold_13325

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_13325_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14..616)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W217_9FLAO
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAO43327.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TetR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_13325_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(838..1443)
DNA (606bp) protein (202aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZS0_9SPHI
5-keto-4-deoxyuronate isomerase
SCN18_25_8_15_R2_B_scaffold_13325_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1669..2436)
DNA (768bp) protein (256aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:ADY52734.1}; EC=1.1.1.125 {ECO:0000313|EMBL:ADY52734.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBP3_PEDSD
SCN18_25_8_15_R2_B_scaffold_13325_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2596..3483
DNA (888bp) protein (296aa)
Carboxymethylenebutenolidase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF07_SPHS2
Dienelactone hydrolase {ECO:0000313|EMBL:KFF02702.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
carboxymethylenebutenolidase
SCN18_25_8_15_R2_B_scaffold_13325_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3579..3812
DNA (234bp) protein (78aa)
Dienelactone hydrolase family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6S4_9SPHI
Dienelactone hydrolase family protein {ECO:0000313|EMBL:EDM38610.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
carboxymethylenebutenolidase
Displaying 5 items

View Taxonomy