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SCN18_25_8_15_R2_B_scaffold_6713_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 2192..3337

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEP3_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 327.0
  • Bit_score: 308
  • Evalue 4.90e-81
DNA-binding protein {ECO:0000313|EMBL:KFF04311.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 327.0
  • Bit_score: 310
  • Evalue 1.80e-81
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 327.0
  • Bit_score: 308
  • Evalue 1.40e-81

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1146
TTGATCGCCGGACCACCTGCCGGTTGGATTATCTTTCTGCTCCCGCAGATCGGTACTTTTTTGCGTATTTTTGATCTGAAAAATTTCATGTCGCTTTCAGCCGGCAAAGATTGCCGAACAAGCCTGGTGATTACTTACGAATATTGGAACATTTATTATGAATACAGAAGTGTTTATTATGAATTTGGAAGCATTGTTATGGGGTACAAATTATTAGCAACTGATTTTGATGATTTCCTTTCTCCATCTGAGGAAGAAAATAAAATACTTTTCAGAACGCCAAAAGGAGATATCAGCTTCGAGCAGCAGCATCTGAGGGAAGGAATGTTCATACTTCAGTCAAAGTACACAATGACGGATGATGTCAGTCTTTTTGGTAAGGGTGAAGAACCGTTGCTGGAAATTCAGCTTAACCTGTCTGATGCTGACATTCATTTTACAAACCAGTCTAAACGCCATATTACCAAAGCATCGTCCGGGAATATTTCCTTCCTGTCTGCCGAGGCTAACCATGCTGATATACAGTTTCACAAGAATACAACATATCAGACCTTTGATGTGCATATTCCACTGGGGTTGCTGAATAAATATGCGGGCGAATCTGATTTGATGGACACATTCATTAACAAAATCTACTTAGGGAAGAGCAGTGTTCTGAAAAACGGTGGCGTAGCTATATATGGCGATATAATAAGAACGATCCGCGATATCCGGAACTGTACATTTGAAGGGCTTACACGCAGAATTTATTTGGAATCGAAAGTATATGAATTAATAGCGCTGCTGTACGAGGGCATCAATAACAAGCCCCGCATCAGGCTGAACAAGTCAGACCGGGATAAAATTCACCAGGCAGCCTACCTTATCAAAGAAAACCTGGAAAAACCTTTAACTATCCTGGATCTGGCCAAACAGGTGGGCATCAATCAAACAAAATTGAAAGAAGGATTTAAAGAGGTATTTGGTAACACGATTTTCGGATACCTGCAGCAAATACGAATGAATGAAGCCAGGAGATATTTGTTAAATACCGATCTTTCTATACAGCAAATCGGCAATTTGCTCGGCTATCAGAATATGTCTAATTTCAGCGCTGCTTTTAAAAAATTCAACGGTATTTCTCCACTAAAGATCAGAGGGCTATAA
PROTEIN sequence
Length: 382
LIAGPPAGWIIFLLPQIGTFLRIFDLKNFMSLSAGKDCRTSLVITYEYWNIYYEYRSVYYEFGSIVMGYKLLATDFDDFLSPSEEENKILFRTPKGDISFEQQHLREGMFILQSKYTMTDDVSLFGKGEEPLLEIQLNLSDADIHFTNQSKRHITKASSGNISFLSAEANHADIQFHKNTTYQTFDVHIPLGLLNKYAGESDLMDTFINKIYLGKSSVLKNGGVAIYGDIIRTIRDIRNCTFEGLTRRIYLESKVYELIALLYEGINNKPRIRLNKSDRDKIHQAAYLIKENLEKPLTILDLAKQVGINQTKLKEGFKEVFGNTIFGYLQQIRMNEARRYLLNTDLSIQQIGNLLGYQNMSNFSAAFKKFNGISPLKIRGL*