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SCN18_25_8_15_R2_B_scaffold_6713

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_6713_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..2158)
DNA (2157bp) protein (719aa)
TonB-dependent receptor, plug n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEP2_FLAJ1
TonB-dependent receptor {ECO:0000313|EMBL:KEQ28322.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
TonB-dependent receptor, plug
SCN18_25_8_15_R2_B_scaffold_6713_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2192..3337
DNA (1146bp) protein (382aa)
Transcriptional regulator, AraC family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEP3_FLAJ1
DNA-binding protein {ECO:0000313|EMBL:KFF04311.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
helix-turn-helix domain-containing protein
SCN18_25_8_15_R2_B_scaffold_6713_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3470..4138
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000379AB14
Uncharacterized protein {ECO:0000313|EMBL:KIF31968.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
methylase
SCN18_25_8_15_R2_B_scaffold_6713_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4271..4843)
DNA (573bp) protein (191aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RSS9_LEAB4
filamentation induced by camp protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADQ15929.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCN18_25_8_15_R2_B_scaffold_6713_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4833..5054)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52828.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
Putative uncharacterized protein id=1825719 bin=GWE2_Bacteroidetes_42_42 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_6713_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5521..6351)
DNA (831bp) protein (277aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedobacter sp. BAL39 RepID=A6E7M9_9SPHI
Short-chain dehydrogenase {ECO:0000313|EMBL:KFF23284.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
short-chain dehydrogenase/reductase SDR
SCN18_25_8_15_R2_B_scaffold_6713_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6468..6656)
DNA (189bp) protein (63aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5N7_9FLAO
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFK35290.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
dehydrogenase
Displaying 7 items

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