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SCN18_25_8_15_R2_B_scaffold_541

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_541_1
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..182
DNA (180bp) protein (60aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFT1_9GAMM
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:EIL98322.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane receptor for ferrienterochelin and colicins
SCN18_25_8_15_R2_B_scaffold_541_2
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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293..2155
DNA (1863bp) protein (621aa)
Sulfotransferase family protein n=4 Tax=Rhodanobacter denitrificans RepID=M4NDP4_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG87578.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_541_3
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2308..2997)
DNA (690bp) protein (230aa)
KDP operon transcriptional regulatory protein KdpE n=3 Tax=Pseudomonas RepID=J0PV24_9PSED
DNA-binding response regulator KdpE {ECO:0000313|EMBL:BAQ82522.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
kdpE2; KDP operon transcriptional regulatory protein KdpE
SCN18_25_8_15_R2_B_scaffold_541_4
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2994..5606)
DNA (2613bp) protein (871aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
UPI0003D5A25D related cluster n=1 Tax=unknown RepID=UPI0003D5A25D
histidine kinase
SCN18_25_8_15_R2_B_scaffold_541_5
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5603..6202)
DNA (600bp) protein (200aa)
potassium-transporting ATPase subunit C n=1 Tax=Acidovorax radicis RepID=UPI00023785E2
K+-transporting ATPase C
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCN18_25_8_15_R2_B_scaffold_541_6
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6212..6514)
DNA (303bp) protein (101aa)
SCN18_25_8_15_R2_B_scaffold_541_7
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6524..8587)
DNA (2064bp) protein (688aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
Potassium-transporting ATPase B chain n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GKK4_NITSI
potassium-transporting ATPase subunit B
SCN18_25_8_15_R2_B_scaffold_541_8
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8602..10299)
DNA (1698bp) protein (566aa)
atkA; AtkA (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=ATKA_LARHH
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
SCN18_25_8_15_R2_B_scaffold_541_9
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10296..10400)
DNA (105bp) protein (35aa)
SCN18_25_8_15_R2_B_scaffold_541_10
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10390..10488)
DNA (99bp) protein (33aa)
SCN18_25_8_15_R2_B_scaffold_541_11
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10705..11382)
DNA (678bp) protein (226aa)
Putative membrane protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4W1_FRAAD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFC85034.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCN18_25_8_15_R2_B_scaffold_541_12
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11917..13002
DNA (1086bp) protein (362aa)
UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB3_9GAMM
UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase {ECO:0000313|EMBL:EIL91154.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UDP-phosphate N-acetylglucosaminyl-1-phosphate transferase
SCN18_25_8_15_R2_B_scaffold_541_13
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13198..13809)
DNA (612bp) protein (204aa)
Acetyltransferase n=2 Tax=Escherichia coli RepID=I4UN24_ECOLX
acetyltransferase
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:ABC29520.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
SCN18_25_8_15_R2_B_scaffold_541_14
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13806..14987)
DNA (1182bp) protein (394aa)
Glycosyl transferase n=1 Tax=Burkholderia sp. YI23 RepID=G8MI29_9BURK
Glycosyl transferase family protein {ECO:0000313|EMBL:KGQ19839.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
glycosyl transferase family protein
SCN18_25_8_15_R2_B_scaffold_541_15
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14992..16143)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LBC8_ACEWD
Uncharacterized protein {ECO:0000313|EMBL:KGQ19836.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_541_16
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16140..17597)
DNA (1458bp) protein (486aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ19833.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
SCN18_25_8_15_R2_B_scaffold_541_17
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17614..18660)
DNA (1047bp) protein (349aa)
SCN18_25_8_15_R2_B_scaffold_541_18
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18664..19533)
DNA (870bp) protein (290aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium RepID=K2DFR6_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EKD96957.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cell wall biogenesis glycosyltransferase
SCN18_25_8_15_R2_B_scaffold_541_19
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19530..20702)
DNA (1173bp) protein (391aa)
Putative polysaccharide pyruvyl transferase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P8S0_VIBME
Putative polysaccharide pyruvyl transferase {ECO:0000313|EMBL:EEX35765.1}; TaxID=675813 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio metschnikovii CIP 69.14.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_541_20
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20699..22039)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI00036E6828
Membrane protein {ECO:0000313|EMBL:KGQ19837.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
polysaccharide biosynthesis protein
SCN18_25_8_15_R2_B_scaffold_541_21
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22051..23445)
DNA (1395bp) protein (465aa)
UDP-glucose dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPK7_9GAMM
nucleotide sugar dehydrogenase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_541_22
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23818..26022)
DNA (2205bp) protein (735aa)
tyrosine protein kinase (EC:2.7.10.2)
Capsular exopolysaccharide family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W268_9GAMM
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:EIL93559.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCN18_25_8_15_R2_B_scaffold_541_23
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26056..26475)
DNA (420bp) protein (140aa)
Low molecular weight phosphotyrosine protein phosphatase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W269_9GAMM
Low molecular weight phosphotyrosine protein phosphatase family protein {ECO:0000313|EMBL:EIL93560.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein-tyrosine-phosphatase
SCN18_25_8_15_R2_B_scaffold_541_24
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27286..28383
DNA (1098bp) protein (366aa)
Polysaccharide export protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W273_9GAMM
Polysaccharide export protein {ECO:0000313|EMBL:EIL93564.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
capsular biosynthesis protein
SCN18_25_8_15_R2_B_scaffold_541_25
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28519..29235
DNA (717bp) protein (239aa)
Lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W274_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIL93565.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2886)
SCN18_25_8_15_R2_B_scaffold_541_26
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29232..30002
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W275_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93566.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_541_27
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30002..32191
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W276_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93567.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_541_28
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32243..33895)
DNA (1653bp) protein (551aa)
60 kDa chaperonin n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM1_9GAMM
chaperonin GroL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_541_29
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34021..34314)
DNA (294bp) protein (98aa)
10 kDa chaperonin n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM0_9GAMM
Co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_541_30
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34622..36466
DNA (1845bp) protein (615aa)
C-type cytochrome biogenesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPV6_9GAMM
thiol:disulfide interchange protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying items 1-30 of 57 in total

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