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SCN18_25_8_15_R2_B_scaffold_1147

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1147_1
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(412..1773)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC67_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97058.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1147_2
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1794..4436)
DNA (2643bp) protein (881aa)
aspartate kinase (EC:4.1.1.20 2.7.2.4)
Diaminopimelate decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKP8_9GAMM
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCN18_25_8_15_R2_B_scaffold_1147_3
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4662..5651
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VW05_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91396.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1147_4
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5694..7523)
DNA (1830bp) protein (610aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Rhodanobacter denitrificans RepID=I4WQX8_9GAMM
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AGG90184.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1147_5
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7635..7976)
DNA (342bp) protein (114aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKL7_9GAMM
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein {ECO:0000313|EMBL:EIL87758.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative methylated DNA-protein cysteine methyltransferase
SCN18_25_8_15_R2_B_scaffold_1147_6
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7992..9110)
DNA (1119bp) protein (373aa)
Phosphate/sulfate permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP4_9GAMM
Phosphate/sulfate permease {ECO:0000313|EMBL:EIM02136.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phosphate/sulfate permease
SCN18_25_8_15_R2_B_scaffold_1147_7
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9139..9768)
DNA (630bp) protein (210aa)
Pit accessory protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP3_9GAMM
Pit accessory protein {ECO:0000313|EMBL:EIM02135.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phosphate transport regulator related to PhoU
SCN18_25_8_15_R2_B_scaffold_1147_8
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9933..11258
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKM1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87762.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
CBS domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1147_9
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11425..14349)
DNA (2925bp) protein (975aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA95_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_25_8_15_R2_B_scaffold_1147_10
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14564..15136
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255945F
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R2_B_scaffold_1147_11
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15136..15432
DNA (297bp) protein (99aa)
arsr family transcriptional regulator n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002559460
ArsR family transcriptional regulator
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R2_B_scaffold_1147_12
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15488..16084
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHS3_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG09054.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCN18_25_8_15_R2_B_scaffold_1147_13
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16119..16784
DNA (666bp) protein (222aa)
ABC transporter related protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2S6_DESRD
NODE_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96280.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
ABC transporter
SCN18_25_8_15_R2_B_scaffold_1147_14
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16781..17647
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2S7_DESRD
NODE_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96281.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1147_15
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17800..18432)
DNA (633bp) protein (211aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TCV5_9GAMM
sodC2; superoxide dismutase
SCN18_25_8_15_R2_B_scaffold_1147_16
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18713..19387
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI0002F82FB7
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF47378.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCN18_25_8_15_R2_B_scaffold_1147_17
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19380..19484
DNA (105bp) protein (35aa)
SCN18_25_8_15_R2_B_scaffold_1147_18
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19481..20773
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034ADFC9
signal transduction histidine kinase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1147_19
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20949..22355
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347F91C
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG88255.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1147_20
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22355..23488
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXW5_9GAMM
ABC transporter permease {ECO:0000313|EMBL:KGI77759.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC-type transport system, involved in lipoprotein release, permease component
SCN18_25_8_15_R2_B_scaffold_1147_21
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23485..24255
DNA (771bp) protein (257aa)
ABC transporter, partial n=1 Tax=Dyella ginsengisoli RepID=UPI000373D3D2
ABC-type antimicrobial peptide transport system, ATPase component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1147_22
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24252..25184
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A6F94
multidrug resistance efflux pump
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1147_23
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25256..26092
DNA (837bp) protein (279aa)
alpha/beta hydrolase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C8DDD
Uncharacterized protein {ECO:0000313|EMBL:EIM01928.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
esterase/lipase
SCN18_25_8_15_R2_B_scaffold_1147_24
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26101..26460
DNA (360bp) protein (120aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B4358
EamA-like transporter family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1147_25
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26457..26897
DNA (441bp) protein (147aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B13EF
Putative transmembrane protein {ECO:0000313|EMBL:EIL96558.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cation/cationic drug transporter
SCN18_25_8_15_R2_B_scaffold_1147_26
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26901..28124
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B0DDC
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EIL94722.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
SCN18_25_8_15_R2_B_scaffold_1147_27
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28672..31551
DNA (2880bp) protein (960aa)
Autotransporter subtilase family protease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNT2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI78053.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
autotransporter-associated beta strand repeat protein
SCN18_25_8_15_R2_B_scaffold_1147_28
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31859..32737)
DNA (879bp) protein (293aa)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD5_9GAMM
glutamyl-Q tRNA(Asp) ligase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1147_29
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32855..33754)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003471664
Arginase family
Arginase family {ECO:0000313|EMBL:AGG88246.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1147_30
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33906..34973)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D9CB9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88245.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 44 in total

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