ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1684

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1684_1
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64..408
DNA (345bp) protein (115aa)
Glutaredoxin-dependent arsenate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND90_9GAMM
glutaredoxin-dependent arsenate reductase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1684_2
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(466..1263)
DNA (798bp) protein (266aa)
Putative amidohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW76_9GAMM
Putative amidohydrolase {ECO:0000313|EMBL:EIL91467.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative amidohydrolase
SCN18_25_8_15_R2_B_scaffold_1684_3
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1275..2420)
DNA (1146bp) protein (382aa)
Methionine aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW77_9GAMM
aspartate/tyrosine/aromatic aminotransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1684_4
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2712..3050
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW81_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91472.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1684_5
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3053..3451
DNA (399bp) protein (133aa)
GntR family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNJ3_9GAMM
GntR family transcriptional regulator {ECO:0000313|EMBL:EIL88784.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1684_6
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3448..4305
DNA (858bp) protein (286aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB42_9GAMM
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL96683.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type multidrug transport system, ATPase component
SCN18_25_8_15_R2_B_scaffold_1684_7
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4302..5294
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW84_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91475.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1684_8
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5468..6154
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNJ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88781.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1684_9
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6258..6992
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96680.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1684_10
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7033..7455
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WD31_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97372.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1684_11
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7670..9052)
DNA (1383bp) protein (461aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
fumarase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNI9_9GAMM
SCN18_25_8_15_R2_B_scaffold_1684_12
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9345..10712
DNA (1368bp) protein (456aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNI8_9GAMM
SCN18_25_8_15_R2_B_scaffold_1684_13
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11079..11393
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO09806.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Quaternary ammonium compound-resistance protein id=1891049 bin=GWB2_Clostridiales_37_7 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
quaternary ammonium compound-resistance protein
SCN18_25_8_15_R2_B_scaffold_1684_14
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11452..11730
DNA (279bp) protein (93aa)
Addiction module killer protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QHQ5_PSECO
Killer protein {ECO:0000313|EMBL:EZH79197.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
addiction module killer protein
SCN18_25_8_15_R2_B_scaffold_1684_15
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11730..12023
DNA (294bp) protein (98aa)
XRE family transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003622A4A
yddM; transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCN18_25_8_15_R2_B_scaffold_1684_16
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12470..13273
DNA (804bp) protein (268aa)
UPI0003CF7945 related cluster n=1 Tax=unknown RepID=UPI0003CF7945
Agmatinase {ECO:0000313|EMBL:ESY85554.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
agmatinase
SCN18_25_8_15_R2_B_scaffold_1684_17
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13291..13911)
DNA (621bp) protein (207aa)
Putative glutathione S-transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W2R4_9GAMM
Glutathione S-transferase {ECO:0000313|EMBL:KGQ19462.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
glutathione S-transferase
SCN18_25_8_15_R2_B_scaffold_1684_18
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14150..15349)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1R1F1_CHRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE57457.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
SCN18_25_8_15_R2_B_scaffold_1684_19
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15457..16176)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W483_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94274.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Ion channel
SCN18_25_8_15_R2_B_scaffold_1684_20
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16325..17209)
DNA (885bp) protein (295aa)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU4_9GAMM
beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:AGG89764.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1684_21
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17278..18552)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3R9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94110.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
flavoprotein, HI0933 family
SCN18_25_8_15_R2_B_scaffold_1684_22
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18589..18807
DNA (219bp) protein (73aa)
UPF0234 protein UUA_01105 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUA7_9GAMM
UPF0234 protein UUA_01105 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
Displaying 22 items

View Taxonomy