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SCN18_25_8_15_R2_B_scaffold_133

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Displaying items 1-30 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_133_1
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..267
DNA (267bp) protein (89aa)
TrbC1 protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQF9_9BURK
trbC; conjugal transfer protein Trbc
Mating pair formation conjugal transfer TrbC transmembrane protein (Module transfer of genomic island CMGI-3) {ECO:0000313|EMBL:ABF08434.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCN18_25_8_15_R2_B_scaffold_133_2
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264..536
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MGR6_PSEAI
Type IV secretory pathway, VirB3-like protein {ECO:0000313|EMBL:KDD60170.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
conjugal transfer protein TrbB
SCN18_25_8_15_R2_B_scaffold_133_3
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

549..3023
DNA (2475bp) protein (825aa)
CagE TrbE VirB component of type IV transporter system n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSW4_THISH
conjugal transfer ATPase TrbE
CagE TrbE VirB component of type IV transporter system {ECO:0000313|EMBL:ACL72979.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
SCN18_25_8_15_R2_B_scaffold_133_4
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3020..3775
DNA (756bp) protein (252aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MII9_ACIET
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:GAO21049.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugal transfer protein Trbj
SCN18_25_8_15_R2_B_scaffold_133_5
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3787..4086
DNA (300bp) protein (100aa)
UPI0003D6A229 related cluster n=1 Tax=unknown RepID=UPI0003D6A229
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC05777.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCN18_25_8_15_R2_B_scaffold_133_6
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4083..5363
DNA (1281bp) protein (427aa)
conjugal transfer protein TrbL n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003103086
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:AKC05778.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
conjugal transfer protein TrbL
SCN18_25_8_15_R2_B_scaffold_133_7
SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, Plasmid-like

Not on your lists

5375..6079
DNA (705bp) protein (235aa)
conjugal transfer protein TrbF n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002F0CC74
VirB8 protein {ECO:0000313|EMBL:AKC05779.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
conjugal transfer protein TrbF
SCN18_25_8_15_R2_B_scaffold_133_8
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6076..7068
DNA (993bp) protein (331aa)
conjugative transfer protein TrbG n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002EF05C7
Type IV secretion system protein PtlF {ECO:0000313|EMBL:AKC05780.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
p-type conjugative transfer protein trbg
SCN18_25_8_15_R2_B_scaffold_133_9
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7071..8330
DNA (1260bp) protein (420aa)
Conjugation TrbI family protein n=1 Tax=Ralstonia sp. PBA RepID=I9W3N0_9RALS
Conjugation TrbI family protein {ECO:0000313|EMBL:EIZ03004.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
conjugation TrbI family protein
SCN18_25_8_15_R2_B_scaffold_133_10
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8327..8572
DNA (246bp) protein (82aa)
conjugal transfer protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002FBBFDA
Uncharacterized protein {ECO:0000313|EMBL:AKC05782.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_133_11
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9308..10030
DNA (723bp) protein (241aa)
TonB family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G440_ALIDK
TonB family protein {ECO:0000313|EMBL:GAO23033.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
TonB family protein
SCN18_25_8_15_R2_B_scaffold_133_12
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10046..10765
DNA (720bp) protein (240aa)
MotA/TolQ/ExbB proton channel n=2 Tax=Alicycliphilus denitrificans RepID=E8TRP0_ALIDB
mota/tolq/exbb proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AEB85185.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_133_13
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10772..11182
DNA (411bp) protein (137aa)
Outer membrane transport energization protein ExbD n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8J4_ACISJ
biopolymer transport protein ExbD/TolR
Outer membrane transport energization protein ExbD {ECO:0000313|EMBL:ABM42569.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCN18_25_8_15_R2_B_scaffold_133_14
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11278..11505
DNA (228bp) protein (76aa)
Hemin uptake protein hemP n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G443_ALIDK
hemin uptake protein HemP
Hemin uptake protein hemP {ECO:0000313|EMBL:AEB85187.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_133_15
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11732..12139)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRP3_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00257.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_133_16
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12358..13047
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRP4_ALIDB
hypothetical protein
Membrane protein {ECO:0000313|EMBL:GAO21996.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_133_17
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13166..13669
DNA (504bp) protein (168aa)
Regulatory protein MarR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G446_ALIDK
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEB85190.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_133_18
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13666..15099
DNA (1434bp) protein (478aa)
Major facilitator superfamily MFS_1 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G447_ALIDK
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:GAO23026.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_133_19
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15153..15536
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRP7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00261.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_133_20
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15560..15892)
DNA (333bp) protein (111aa)
Small multidrug resistance protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRP8_ALIDB
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:AEB85193.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_133_21
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15970..16698
DNA (729bp) protein (243aa)
Chromate transporter n=2 Tax=Alicycliphilus denitrificans RepID=E8TRP9_ALIDB
chromate transporter
Chromate transporter {ECO:0000313|EMBL:AEB85194.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_133_22
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16701..17294
DNA (594bp) protein (198aa)
Chromate transporter n=2 Tax=Alicycliphilus denitrificans RepID=E8TRQ0_ALIDB
chromate transporter
Chromate transporter {ECO:0000313|EMBL:AEB85195.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_133_23
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17271..18038)
DNA (768bp) protein (256aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
NAD-dependent protein deacylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRQ1_ALIDB
silent information regulator protein sir2
SCN18_25_8_15_R2_B_scaffold_133_24
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18060..18725)
DNA (666bp) protein (222aa)
Regulatory protein TetR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRQ2_ALIDB
TetR family transcriptional regulator
TetR/AcrR family transcriptional regulator {ECO:0000313|EMBL:GAO23020.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_133_25
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18809..19162
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRQ3_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO23019.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_133_26
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19221..19673
DNA (453bp) protein (151aa)
3-demethylubiquinone-9 3-methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRQ5_ALIDB
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:GAO23017.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_133_27
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19705..20151
DNA (447bp) protein (149aa)
Activator of Hsp90 ATPase 1 family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRQ6_ALIDB
activator of hsp90 atpase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:GAO23016.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_133_28
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20193..20678
DNA (486bp) protein (162aa)
3-demethylubiquinone-9 3-methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRQ7_ALIDB
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:ADV00271.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_133_29
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20789..21172
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRQ8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85203.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_133_30
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21179..21637
DNA (459bp) protein (153aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRQ9_ALIDB
activator of hsp90 atpase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:GAO23013.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying items 1-30 of 190 in total

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