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SCN18_25_8_15_R2_B_scaffold_796

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_796_1
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202..939
DNA (738bp) protein (246aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Pseudouridine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWW0_ALIDB
pseudouridine synthase
SCN18_25_8_15_R2_B_scaffold_796_2
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1047..2012
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWV9_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00749.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_3
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1999..2829
DNA (831bp) protein (277aa)
Polysaccharide deacetylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWV8_ALIDB
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADV00748.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_4
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2844..3869
DNA (1026bp) protein (342aa)
Fatty acid hydroxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWV7_ALIDB
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:ADV00747.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_5
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3885..4787
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=F4GEM6_ALIDK
Transmembrane protein {ECO:0000313|EMBL:GAO24252.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
transmembrane protein
SCN18_25_8_15_R2_B_scaffold_796_6
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4784..5605
DNA (822bp) protein (274aa)
Molybdopterin binding domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWV5_ALIDB
molybdopterin binding domain-containing protein
Molybdopterin binding domain protein {ECO:0000313|EMBL:ADV00745.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_7
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5777..7192
DNA (1416bp) protein (472aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Glutamine synthetase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWV4_ALIDB
glutamine synthetase, type i
SCN18_25_8_15_R2_B_scaffold_796_8
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7366..7854
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWV3_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83831.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_796_9
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7934..8944
DNA (1011bp) protein (337aa)
ATP-binding region ATPase domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWV2_ALIDB
Nitrogen regulation protein {ECO:0000313|EMBL:GAO24248.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
ATP-binding domain-containing protein
SCN18_25_8_15_R2_B_scaffold_796_10
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8986..10425
DNA (1440bp) protein (480aa)
Nitrogen regulation protein NR(I) n=2 Tax=Alicycliphilus denitrificans RepID=E8TWV1_ALIDB
nitrogen regulation protein nr(i)
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family {ECO:0000313|EMBL:AEB83833.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_796_11
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10479..11255)
DNA (777bp) protein (259aa)
Exodeoxyribonuclease III Xth n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWV0_ALIDB
exodeoxyribonuclease III
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:ADV00740.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_12
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11379..12056
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWU1_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24237.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_796_13
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12053..14413
DNA (2361bp) protein (787aa)
Putative membrane protein n=1 Tax=Burkholderia sp. KJ006 RepID=I2DU06_9BURK
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFJ88132.1}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ006.;"
SCN18_25_8_15_R2_B_scaffold_796_14
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14410..15066
DNA (657bp) protein (219aa)
OmpA/MotB domain protein n=2 Tax=Alicycliphilus denitrificans RepID=F4GEP2_ALIDK
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADV00729.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_15
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15100..15636
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWT8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00728.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_16
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15602..16096)
DNA (495bp) protein (165aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEP3_ALIDK
SCN18_25_8_15_R2_B_scaffold_796_17
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16371..17195)
DNA (825bp) protein (275aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Thymidylate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT6_ALIDB
SCN18_25_8_15_R2_B_scaffold_796_18
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17238..18662)
DNA (1425bp) protein (475aa)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEB83847.1}; EC=1.1.2.4 {ECO:0000313|EMBL:AEB83847.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
FAD linked oxidase domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT5_ALIDB
fad linked oxidase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_796_19
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18659..19087)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT4_ALIDB
hypothetical protein
Membrane protein {ECO:0000313|EMBL:GAO24230.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_796_20
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19109..20362
DNA (1254bp) protein (418aa)
UPF0761 membrane protein Alide_2997 n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT3_ALIDB
ribonuclease bn
UPF0761 membrane protein Alide_2997 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_21
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20481..22523)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT2_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO24228.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_796_22
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22558..23850)
DNA (1293bp) protein (431aa)
Squalene-associated FAD-dependent desaturase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT1_ALIDB
squalene-associated FAD-dependent desaturase
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:GAO24227.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_796_23
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24033..25667
DNA (1635bp) protein (545aa)
Chemotaxis sensory transducer n=2 Tax=Alicycliphilus denitrificans RepID=E8TWT0_ALIDB
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEB83852.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_796_24
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25699..26538)
DNA (840bp) protein (280aa)
squalene synthase (EC:2.5.1.32)
Squalene synthase HpnD n=2 Tax=Alicycliphilus denitrificans RepID=E8TWS9_ALIDB
Squalene synthase {ECO:0000313|EMBL:GAO24225.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_796_25
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26656..27534)
DNA (879bp) protein (293aa)
Squalene synthase HpnC n=2 Tax=Alicycliphilus denitrificans RepID=E8TWS8_ALIDB
squalene synthase hpnc
Squalene synthase HpnC {ECO:0000313|EMBL:ADV00718.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_26
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27627..28898
DNA (1272bp) protein (424aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWS7_ALIDB
efflux transporter, rnd family, mfp subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV00717.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_796_27
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28908..32027
DNA (3120bp) protein (1040aa)
Acriflavin resistance protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWS6_ALIDB
Acriflavin resistance protein {ECO:0000313|EMBL:ADV00716.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
acriflavin resistance protein
SCN18_25_8_15_R2_B_scaffold_796_trna_1
unknown

Not on your lists

32113..32196
DNA (84bp)
transferRNA Leu
SCN18_25_8_15_R2_B_scaffold_796_28
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32252..33562
DNA (1311bp) protein (437aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Trigger factor n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEQ5_ALIDK
trigger factor Tig
SCN18_25_8_15_R2_B_scaffold_796_29
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33687..34295
DNA (609bp) protein (203aa)
ATP-dependent clp protease, proteolytic subunit clpp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TWS4_ALIDB
Displaying items 1-30 of 39 in total

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