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SCN18_25_8_15_R2_B_scaffold_897

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_897_1
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..155
DNA (153bp) protein (51aa)
Beta-lactamase domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G561_ALIDK
nudix hydrolase
Beta-lactamase domain protein {ECO:0000313|EMBL:AEB86407.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_897_2
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148..873
DNA (726bp) protein (242aa)
RNA-binding S4 domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G562_ALIDK
RNA-binding S4 domain-containing protein
RNA-binding S4 domain protein {ECO:0000313|EMBL:AEB86408.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_897_3
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1369..1539)
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRX4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86409.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_897_4
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..2623
DNA (918bp) protein (306aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Cysteine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G564_ALIDK
SCN18_25_8_15_R2_B_scaffold_897_5
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2794..3561
DNA (768bp) protein (256aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFT9_ACIET
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACM34440.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCN18_25_8_15_R2_B_scaffold_897_6
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3558..4769
DNA (1212bp) protein (404aa)
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Phospholipase D/Transphosphatidylase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFU0_ACIET
cardiolipin synthase 2
SCN18_25_8_15_R2_B_scaffold_897_7
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4769..5782
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003648A67
Predicted integral membrane protein {ECO:0000313|EMBL:GAD21712.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_897_8
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5745..6863
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003692EE2
Uncharacterized protein {ECO:0000313|EMBL:GAD21713.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
heat shock protein DnaJ domain-containing protein
SCN18_25_8_15_R2_B_scaffold_897_9
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6924..7139
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JTX9_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EPL63179.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
SCN18_25_8_15_R2_B_scaffold_897_10
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7136..7432
DNA (297bp) protein (99aa)
Plasmid stabilization system protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JRA9_PSEST
Plasmid stabilization system protein {ECO:0000313|EMBL:EPL63178.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
toxin, RelE family
SCN18_25_8_15_R2_B_scaffold_897_11
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7496..9256
DNA (1761bp) protein (587aa)
FAD dependent oxidoreductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRX7_ALIDB
FAD-dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:GAO25011.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_897_12
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9171..9485)
DNA (315bp) protein (105aa)
Regulatory protein MarR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY5_ALIDB
MarR family transcriptional regulator
Regulatory protein MarR {ECO:0000313|EMBL:ADV01462.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_897_13
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9434..9748)
DNA (315bp) protein (105aa)
Regulatory protein MarR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY5_ALIDB
regulatory protein marr
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEB86420.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_897_14
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9879..10646
DNA (768bp) protein (256aa)
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (EC:1.1.1.100)
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:AEB86421.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEB86421.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY6_ALIDB
SCN18_25_8_15_R2_B_scaffold_897_15
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10690..11472
DNA (783bp) protein (261aa)
2-ketocyclohexanecarboxyl-CoA hydrolase (EC:4.1.3.36)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2-ketocyclohexanecarboxyl-CoA hydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY7_ALIDB
SCN18_25_8_15_R2_B_scaffold_897_16
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11492..12649
DNA (1158bp) protein (386aa)
Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY8_ALIDB
cyclohexanecarboxyl-CoA dehydrogenase
Cyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:ADV01465.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_897_17
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12769..14424
DNA (1656bp) protein (552aa)
Cyclohexanecarboxylate-CoA ligase {ECO:0000313|EMBL:AEB86424.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEB86424.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
cyclohexanecarboxylate-CoA ligase (EC:6.2.1.26)
Cyclohexanecarboxylate-CoA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G578_ALIDK
SCN18_25_8_15_R2_B_scaffold_897_18
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14430..15209
DNA (780bp) protein (260aa)
enoyl-CoA hydratase/isomerase id=12553231 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_25_8_15_R2_B_scaffold_897_19
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15319..16170
DNA (852bp) protein (284aa)
inner-membrane translocator id=12553232 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_25_8_15_R2_B_scaffold_897_20
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16187..17164
DNA (978bp) protein (326aa)
inner-membrane translocator id=12553233 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_25_8_15_R2_B_scaffold_897_21
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17161..17883
DNA (723bp) protein (241aa)
ABC transporter-like protein id=12553234 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_25_8_15_R2_B_scaffold_897_22
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17880..18584
DNA (705bp) protein (235aa)
ABC transporter-like protein id=12553235 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_25_8_15_R2_B_scaffold_897_23
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18622..19803
DNA (1182bp) protein (394aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=12553236 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_25_8_15_R2_B_scaffold_897_24
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19907..20839)
DNA (933bp) protein (311aa)
Electron transfer flavoprotein alpha subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ53_ALIDB
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:AEB86425.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_897_25
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20857..21606)
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TRZ1_ALIDB
electron transfer flavoprotein subunits alpha/beta
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ADV01468.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_897_26
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21631..22605)
DNA (975bp) protein (325aa)
2-nitropropane dioxygenase NPD n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRZ2_ALIDB
2-nitropropane dioxygenase
2-nitropropane dioxygenase {ECO:0000313|EMBL:GAO25026.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_897_27
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22613..23608)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRZ3_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01470.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_897_28
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23681..24907)
DNA (1227bp) protein (409aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRZ4_ALIDB
l-carnitine dehydratase/bile acid-inducible protein f
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADV01471.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_897_29
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24932..25732)
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase/isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRZ6_ALIDB
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADV01473.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_897_30
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25848..26978)
DNA (1131bp) protein (377aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G586_ALIDK
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEB86432.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 1-30 of 39 in total

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