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SCN18_25_8_15_R2_B_scaffold_968

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_968_1
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163..1812)
DNA (1650bp) protein (550aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBY9_ALIDK
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:GAO25760.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_968_2
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1939..4236)
DNA (2298bp) protein (766aa)
Heavy metal translocating P-type ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRB3_ALIDB
Cation-transporting ATPase protein {ECO:0000313|EMBL:GAO25759.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
heavy metal translocating p-type atpase
SCN18_25_8_15_R2_B_scaffold_968_3
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4340..4537
DNA (198bp) protein (66aa)
Heavy metal transport/detoxification protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRB2_ALIDB
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AEB82481.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_968_4
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4583..6343)
DNA (1761bp) protein (587aa)
5''''-nucleotidase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00030FA0A4
sulfur oxidation protein
Tax=CG_Rhodof_02
SCN18_25_8_15_R2_B_scaffold_968_5
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6386..7063)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036CA743
Uncharacterized protein {ECO:0000313|EMBL:GAD21449.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_968_6
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7084..7896)
DNA (813bp) protein (271aa)
SoxAX cytochrome complex subunit A {ECO:0000256|PIRNR:PIRNR038455}; EC=1.8.2.- {ECO:0000256|PIRNR:PIRNR038455};; Protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Sulfur oxidizing protein A {ECO:0000256|PIRNR:PIRNR038455}; Thiosulfate-oxidizing multienzyme system protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
UPI0003A42E54 related cluster n=1 Tax=unknown RepID=UPI0003A42E54
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_968_7
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7981..8292)
DNA (312bp) protein (104aa)
Sulphur oxidation protein SoxZ n=5 Tax=Comamonas testosteroni RepID=B7X4K5_COMTE
sulfur oxidation protein
Uncharacterized protein {ECO:0000313|EMBL:ACY33616.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
SCN18_25_8_15_R2_B_scaffold_968_8
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8335..8793)
DNA (459bp) protein (153aa)
sulfur oxidation protein SoxY n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003776C2D
sulfur oxidation protein SoxY
Tax=CG_Rhodof_02
SCN18_25_8_15_R2_B_scaffold_968_9
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8882..9955)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00030CF649
cytochrome C
Tax=GWA2_Curvibacter_64_110_curated
SCN18_25_8_15_R2_B_scaffold_968_10
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9939..11321)
DNA (1383bp) protein (461aa)
UPI0003D3E3D1 related cluster n=1 Tax=unknown RepID=UPI0003D3E3D1
Sulfite oxidase and related enzymes {ECO:0000313|EMBL:GAD21454.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
oxidoreductase, molybdopterin binding protein
SCN18_25_8_15_R2_B_scaffold_968_11
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11405..11743)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002DE9693
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95380.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCN18_25_8_15_R2_B_scaffold_968_12
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11850..12335)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3I9_RAMTT
hypothetical protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
SCN18_25_8_15_R2_B_scaffold_968_13
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12332..13321)
DNA (990bp) protein (330aa)
UPI00039E2A52 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00039E2A52
Metallo-beta-lactamase {ECO:0000313|EMBL:GAD21457.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Cephalosporinase
SCN18_25_8_15_R2_B_scaffold_968_14
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13365..14447
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381A3B2
Uncharacterized protein {ECO:0000313|EMBL:GAD21458.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_968_15
SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14456..15067)
DNA (612bp) protein (204aa)
Cytochrome c, class I id=1267769 bin=GWE1_Burkholderiales_65_30 species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
cytochrome c, class I
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
SCN18_25_8_15_R2_B_scaffold_968_16
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15158..16447)
DNA (1290bp) protein (430aa)
Sulfide dehydrogenase (Flavocytochrome), flavoprotein subunit {ECO:0000313|EMBL:ABM36980.1}; EC=1.8.2.- {ECO:0000313|EMBL:ABM36980.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
flavocytochrome C sulfide dehydrogenase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031A1EF7
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCN18_25_8_15_R2_B_scaffold_968_17
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16458..16766)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DE6AF6
cytochrome c, class I
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCN18_25_8_15_R2_B_scaffold_968_18
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16896..17225)
DNA (330bp) protein (110aa)
ArsR family transcriptional regulator n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00037BC5BC
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family-like protein {ECO:0000313|EMBL:AEG92461.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_25_8_15_R2_B_scaffold_968_19
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17344..17823
DNA (480bp) protein (160aa)
Cu(I)-responsive transcriptional regulator n=2 Tax=Alicycliphilus denitrificans RepID=E8TRB1_ALIDB
MerR family transcriptional regulator
Cu(I)-responsive transcriptional regulator {ECO:0000313|EMBL:ADU97822.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_968_20
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17833..18120)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=B9M9U9_ACIET
Glutathione peroxidase {ECO:0000313|EMBL:GAO25755.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_968_21
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18568..19821)
DNA (1254bp) protein (418aa)
Nucleoside recognition domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRA8_ALIDB
nucleoside recognition domain-containing protein
Nucleoside recognition domain-containing protein {ECO:0000313|EMBL:GAO25754.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_968_22
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19841..20791)
DNA (951bp) protein (317aa)
Exonuclease RdgC n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRA7_ALIDB
exonuclease RdgC
Exonuclease RdgC {ECO:0000313|EMBL:AEB82476.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_968_23
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21008..21601
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRA6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO25752.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_968_24
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21716..22324
DNA (609bp) protein (203aa)
Lipid A deacylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRA5_ALIDB
lipid A 3-O-deacylase-like protein
Lipid A 3-O-deacylase-like protein {ECO:0000313|EMBL:GAO25751.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_968_25
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22652..23623)
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR98_ALIDB
hypothetical protein
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:GAO25744.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_968_26
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23702..25093)
DNA (1392bp) protein (464aa)
Alpha/beta hydrolase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GQJ7_9BURK
Alpha/beta hydrolase {ECO:0000313|EMBL:ESH93172.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_968_27
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25285..26088
DNA (804bp) protein (268aa)
Regulatory protein IclR n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR97_ALIDB
regulatory protein iclr
Regulatory protein iclr {ECO:0000313|EMBL:GAO25743.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_968_28
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26155..29784)
DNA (3630bp) protein (1210aa)
Diguanylate cyclase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR96_ALIDB
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:AEB82465.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_968_29
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30118..31221)
DNA (1104bp) protein (368aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR95_ALIDB
SCN18_25_8_15_R2_B_scaffold_968_30
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31251..31730)
DNA (480bp) protein (160aa)
NLP/P60 protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR94_ALIDB
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:GAO25738.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying items 1-30 of 33 in total

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