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SCN18_25_8_15_R2_B_scaffold_1565

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1565_1
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(305..1693)
DNA (1389bp) protein (463aa)
Aminophosphonate oxidoreductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA63_ALIDK
aminophosphonate oxidoreductase
Aminophosphonate oxidoreductase {ECO:0000313|EMBL:AEB86866.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1565_2
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1793..2332)
DNA (540bp) protein (180aa)
Phosphonate degradation operons associated HDIG domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA62_ALIDK
phosphonate degradation operons associated HDIG domain-containing protein
Phosphonate degradation operons associated HDIG domain protein {ECO:0000313|EMBL:AEB86865.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1565_3
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2338..3786)
DNA (1449bp) protein (483aa)
phosphonoacetaldehyde dehydrogenase (EC:1.2.1.8)
Phosphonoacetaldehyde dehydrogenase {ECO:0000313|EMBL:AEB86864.1}; EC=1.2.1.8 {ECO:0000313|EMBL:AEB86864.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Phosphonoacetaldehyde dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA61_ALIDK
SCN18_25_8_15_R2_B_scaffold_1565_4
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3818..5053)
DNA (1236bp) protein (412aa)
Phosphonoacetate hydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA60_ALIDK
phosphonoacetate hydrolase
Phosphonoacetate hydrolase {ECO:0000313|EMBL:AEB86863.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1565_5
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5055..5783)
DNA (729bp) protein (243aa)
Phosphonate utilization associated transcriptional regulator n=2 Tax=Alicycliphilus denitrificans RepID=E8TX17_ALIDB
phosphonate utilization associated transcriptional regulator
Phosphonate utilization associated transcriptional regulator {ECO:0000313|EMBL:ADV01920.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_1565_6
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5926..6963
DNA (1038bp) protein (346aa)
2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component n=2 Tax=Alicycliphilus denitrificans RepID=E8TX16_ALIDB
2-aminoethylphosphonate ABC transporter substrate-binding protein
2-aminoethylphosphonate ABC transporter 1-aminoethylphosphonate-binding protein component {ECO:0000313|EMBL:GAO25518.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1565_7
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7041..8174
DNA (1134bp) protein (378aa)
2-aminoethylphosphonate ABC transport system, ATP-binding protein component n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX15_ALIDB
2-aminoethylphosphonate ABC transporter ATP-binding protein
2-aminoethylphosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO25517.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1565_8
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8171..9892
DNA (1722bp) protein (574aa)
2-aminoethylphosphonate ABC transport system, permease protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA56_ALIDK
2-aminoethylphosphonate ABC transporter permease {ECO:0000313|EMBL:GAO25516.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
2-aminoethylphosphonate ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1565_9
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9927..11057
DNA (1131bp) protein (377aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX13_ALIDB
2-aminoethylphosphonate--pyruvate transaminase
SCN18_25_8_15_R2_B_scaffold_1565_10
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11184..11858
DNA (675bp) protein (225aa)
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8TX12_ALIDB
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEB86857.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1565_11
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12164..13609
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA53_ALIDK
integral membrane sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_1565_12
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13653..14681
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX10_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01913.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_1565_13
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14678..15751
DNA (1074bp) protein (358aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA51_ALIDK
NAD/NADP octopine/nopaline dehydrogenase
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:GAO25511.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1565_14
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15762..16460)
DNA (699bp) protein (233aa)
RES domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX08_ALIDB
RES domain-containing protein {ECO:0000313|EMBL:GAO25510.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
RES domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1565_15
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16460..16831)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX07_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO25509.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1565_16
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16914..17408)
DNA (495bp) protein (165aa)
Regulatory protein MarR n=2 Tax=Alicycliphilus denitrificans RepID=E8TX06_ALIDB
MarR family transcriptional regulator
Regulatory protein MarR {ECO:0000313|EMBL:ADV01909.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_1565_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17606..19588
DNA (1983bp) protein (661aa)
acetate--CoA ligase (EC:6.2.1.1)
AMP-dependent synthetase and ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8TX05_ALIDB
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADV01908.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_1565_18
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19639..20130
DNA (492bp) protein (164aa)
Extracellular ligand-binding receptor n=2 Tax=Alicycliphilus denitrificans RepID=E8TX04_ALIDB
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:GAO25505.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying 18 items

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