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SCN18_25_8_15_R2_B_scaffold_1776

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1776_1
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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175..1533
DNA (1359bp) protein (453aa)
Peptidase M16 domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B5_ALIDB
peptidase m16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AEB83394.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1776_2
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1530..2120
DNA (591bp) protein (197aa)
Methyltransferase {ECO:0000313|EMBL:AEB83395.1}; EC=2.1.1.171 {ECO:0000313|EMBL:AEB83395.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B4_ALIDB
methyltransferase
SCN18_25_8_15_R2_B_scaffold_1776_3
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2248..2736
DNA (489bp) protein (163aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Phosphopantetheine adenylyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B3_ALIDB
SCN18_25_8_15_R2_B_scaffold_1776_4
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2820..3134)
DNA (315bp) protein (105aa)
Transport-associated protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B2_ALIDB
transport-associated protein
Transport-associated protein {ECO:0000313|EMBL:ADV01165.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_1776_5
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3224..3616)
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B1_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24786.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1776_6
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3682..3846)
DNA (165bp) protein (55aa)
UPF0391 membrane protein Alide_3444 n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B0_ALIDB
hypothetical protein
UPF0391 membrane protein Alide_3444 {ECO:0000256|HAMAP-Rule:MF_01361}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_1776_7
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3989..5332)
DNA (1344bp) protein (448aa)
CHASE3 domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1A9_ALIDB
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:GAO24784.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1776_8
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5442..6074
DNA (633bp) protein (211aa)
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8U1A8_ALIDB
two component LuxR family transcriptional regulator
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:GAO24783.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1776_9
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6052..6483)
DNA (432bp) protein (144aa)
Response regulator receiver n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9I7_ALIDK
response regulator receiver
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:GAO24782.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1776_10
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6589..7353)
DNA (765bp) protein (255aa)
UBA/THIF-type NAD/FAD binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1A6_ALIDB
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:AEB83403.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1776_11
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7418..8854)
DNA (1437bp) protein (479aa)
Carboxyl-terminal protease n=2 Tax=Alicycliphilus denitrificans RepID=E8U1A5_ALIDB
carboxyl-terminal protease
Carboxyl-terminal protease {ECO:0000313|EMBL:AEB83404.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1776_12
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8941..9684)
DNA (744bp) protein (248aa)
phosphoglycerate mutase (EC:5.4.2.4)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1A4_ALIDB
SCN18_25_8_15_R2_B_scaffold_1776_13
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9758..10165
DNA (408bp) protein (136aa)
Rhodanese domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1A3_ALIDB
rhodanese domain-containing protein
Rhodanese-like protein {ECO:0000313|EMBL:AEB83406.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1776_14
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10214..10471
DNA (258bp) protein (86aa)
Glutaredoxin 3 n=2 Tax=Alicycliphilus denitrificans RepID=F4G9J2_ALIDK
glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:AEB83407.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1776_15
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10579..11034
DNA (456bp) protein (152aa)
Protein-export protein SecB n=2 Tax=Alicycliphilus denitrificans RepID=E8U1A1_ALIDB
protein-export protein secb
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1776_16
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11101..12087
DNA (987bp) protein (329aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Alicycliphilus denitrificans RepID=E8U1A0_ALIDB
nad-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1776_17
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12134..12778)
DNA (645bp) protein (215aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349E458
3,4-dihydroxy-2-butanone 4-phosphate synthase
SCN18_25_8_15_R2_B_scaffold_1776_18
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13159..14010)
DNA (852bp) protein (284aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Pantothenate synthetase n=2 Tax=Alicycliphilus denitrificans RepID=E8U193_ALIDB
pantoate--beta-alanine ligase
SCN18_25_8_15_R2_B_scaffold_1776_19
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14022..14906)
DNA (885bp) protein (295aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U192_ALIDB
SCN18_25_8_15_R2_B_scaffold_1776_20
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15144..16025
DNA (882bp) protein (294aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=2 Tax=Alicycliphilus denitrificans RepID=E8U191_ALIDB
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:GAO24763.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_1776_21
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16089..17213
DNA (1125bp) protein (375aa)
quinolinate synthetase complex, a subunit (EC:2.5.1.72)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Quinolinate synthetase complex, A subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U190_ALIDB
SCN18_25_8_15_R2_B_scaffold_1776_22
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17430..17945
DNA (516bp) protein (172aa)
Para-aminobenzoate synthase, subunit I n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U189_ALIDB
para-aminobenzoate synthase, subunit i
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:ADV01142.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Displaying 22 items

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