ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2009_2

Organism: SCN18_25_8_15_R2_B_Burkholderiales_69_21

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(845..1465)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=2 Tax=Alicycliphilus denitrificans RepID=E8TVL7_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 206.0
  • Bit_score: 384
  • Evalue 6.40e-104
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 206.0
  • Bit_score: 384
  • Evalue 1.80e-104
Tetracycline transcriptional repressor MAATS-type domain-containing protein {ECO:0000313|EMBL:AEB82825.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 206.0
  • Bit_score: 384
  • Evalue 9.00e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Comamonas_56x → CN-SCN_Comamonas_56x → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCTCGACGCACCAAGGAAGACGCAGACGCCACGCGCAACGCCCTGTTGGACGCGGCCGAGCTCGTCTTCTATGAAAAGGGGGTGGCGCGCGCATCGCTGAGCGAGATCGCCCAGGCGGCCGGCGCCACGCGCGGTGCCATTTACTGGCACTTCAAGGACAAGGTGGATCTGTTCAACGCGATGATGGATCGCGCCACCCTGCCGCTCGAACGCGTGTGCAACGCCGGCGAGGCCGCGCACGCCAGGGAGCCGCTCGCGCAGCTGCGCGGCATGGTGGAGTTGCTGCTGCGCAGCATCGTGAGCGACGTCCACATGCGCCGCGTGTTCGAGATCGCCCTGTACCGCGTGGAATATGTGAGCGAGCTCAGCGGCGTGCGCGAGCGCCATCTGGCTGCGCACGCTCGTTTCCAGGCGTTGCTGGAGCGCAATCTGTCGCTTGCGGCCGCCCAGGCATCGCTGGCGCTGCCGATGCCCGCGGCAATGGCTGCGGCCGGCCTGCATGCCCTGTTCAACGGCCTGCTGCAATCGTGGTTGCTGGGCGAAGCCAGCTTCGACCTGCCGGCCGCGGGCCGTGCGGCCGTGGACGCTTATCTGCGTGGATTGGGCTTTCACGTGTGA
PROTEIN sequence
Length: 207
MARRTKEDADATRNALLDAAELVFYEKGVARASLSEIAQAAGATRGAIYWHFKDKVDLFNAMMDRATLPLERVCNAGEAAHAREPLAQLRGMVELLLRSIVSDVHMRRVFEIALYRVEYVSELSGVRERHLAAHARFQALLERNLSLAAAQASLALPMPAAMAAAGLHALFNGLLQSWLLGEASFDLPAAGRAAVDAYLRGLGFHV*