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SCN18_13_7_16_R2_B_scaffold_6149_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(1..1533)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 511.0
  • Bit_score: 952
  • Evalue 2.10e-274
DNA-directed RNA polymerase subunit beta' n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF84_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 511.0
  • Bit_score: 952
  • Evalue 1.50e-274
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 511.0
  • Bit_score: 952
  • Evalue 4.20e-275

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1533
GTGCTCGAATCAACCACTTTCGACCAGCTTCGCATCGGCCTGGCCACCGCAGACGACATCCGTCGCTGGTCCTACGGCGAGGTCAAGAAGCCGGAGACCATCAACTACCGCACCCTGAAGCCCGAGAAGGACGGCCTGTTCGGCGAGCAGATCTTCGGTCCCTCGCGGGACTGGGAGTGCGCGTGCGGCAAGTACAAGCGCGTCCGCTTCAAGGGCATCGTCTGCGAGCGCTGCGGCGTCGAGGTCACCAAGTCCTCGGTCCGTCGCGAGCGGATGGGCCACATCGAGCTCGCCGCGCCCGTCACGCACATCTGGTACTTCAAGGGCGTCCCGTCGCGCCTCGGGTACCTGCTGGACATGGCGCCGAAGGACCTCGAGAAGGTCATCTACTTCGCCGCGTACATGGTGATCTCGGTCGACGAGGAGGCGCGTCACCGCGACCTCCCGACGCACGAGAACAACCTGCGTCTCGAGATGAAGACGATCGCGGACCGCCGCGACGCCCGCATCGCGACCCGCCTCCAGAAGCTGGAGGAGGAGCTCGCCGCGCTCGAGGAGGAGGGTGCCAAGGCCGACCAGAAGAAGAAGGTCAAGGACGCCGCCGAGAAGGAGATGTCCGCCACCCGCAAGAACGCGGACGAGCAGATCGCGAAGCTCGAGCGCGTGTGGGAGGACTTCCGCACCCTCGAGGTCGGCGCCCTCAAGCCCGAGGACGACGTCTTCCACGAGCTGCAGGACCGCTTCGGCCAGTACTTCGAGGCCTACATGGGCGCGGAGTCGATCCAGCGCCGCCTGCAGGCCTTCGACCTGGCCGCCGAGTCCGAGAGCCTGCACCTGCAGATCTCGGAGGGCAAGGGTCAGCGCGAGATCCGCGCGATCAAGCGCCTGCGCGTGGTCAACTCGTTCCTGCAGACCGGGATGAGCCCGGCCTCGATGGTCCTCGACGTGGTGCCGGTGATCCCGCCGGAGCTGCGCCCGATGGTGCAGCTGGACGGCGGCCGCTTCGCGACCTCCGACCTGAACGACCTGTACCGTCGCGTGATCAACCGCAACAACCGCCTCCGCCGTCTGATCGACCTCGGTGCCCCCGAGATCATCGTCAACAACGAGAAGCGGATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGTCGCGGCCGCCCCGTCACGGGCACGGGCAACCGCGCGCTCAAGTCCCTGAGCGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGACTACTCGGGCCGGTCGGTGATCGTCGTCGGTCCGCAGCTGAAGCTGCACCAGTGCGGTCTGCCGAAGCTGATGGCGCTGGAGCTTTTCAAGCCGTTCGTCATGAAGCGGCTCGTCGATCTCAATCACGCCCAGAACATCAAGTCGGCCAAGCGCATGGTCGAGCGGCAGCGGCCCGAGGTGTGGGACGTGCTGGAGGAGGTGATCGGGGCGCATCCGGTGATGCTCAACCGGGCGCCGACCCTGCACCGCCTCGGCATCCAGGCG
PROTEIN sequence
Length: 511
VLESTTFDQLRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWECACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDMAPKDLEKVIYFAAYMVISVDEEARHRDLPTHENNLRLEMKTIADRRDARIATRLQKLEEELAALEEEGAKADQKKKVKDAAEKEMSATRKNADEQIAKLERVWEDFRTLEVGALKPEDDVFHELQDRFGQYFEAYMGAESIQRRLQAFDLAAESESLHLQISEGKGQREIRAIKRLRVVNSFLQTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQRPEVWDVLEEVIGAHPVMLNRAPTLHRLGIQA