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SCN18_13_7_16_R2_B_scaffold_6149_2

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(1577..3082)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 501.0
  • Bit_score: 964
  • Evalue 3.00e-278
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium sp. B19 RepID=UPI000345EFEC similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 501.0
  • Bit_score: 964
  • Evalue 2.80e-278
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 501.0
  • Bit_score: 961
  • Evalue 5.10e-278

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1506
TTCGACCGCTCCAACCAGGGAACCTCGTACAACCAGCGCGTCATCGTCTCGGCGGGCGACCGCATCGAGGCCGGCGAGGTCATCGCCGACGGCCCGGCGACGGAGAACGGCGAGCTCGCGCTCGGCAAGAACCTCCTCGTCGCGTTCATGACGTGGGAGGGCCACAACTTCGAGGACGCCATCATCCTCAGCCAGGACCTCGTGAAGGACGACACCCTCTCCTCGATCCACATCGAGGAGTACGAGGTGGACGCCCGCGACACGAAGCTGGGCAAGGAGGAGATCACCCGCGACCTGCCGAACGTGAGCCCGGACCTGCTGAAGGATCTGGACGAGCGCGGCATCGTGCGCATCGGCGCCGAGGTGCGCCCCGGCGACATCCTCGTCGGCAAGGTCACGCCGAAGGGCGAGACCGAGCTCTCGGCCGAGGAGCGCCTGCTCCGCGCGATCTTCAACGAGAAGAGCCGCGAGGTCCGCGACACGTCGCTGAAGGTGCCGCACGGCGAGCAGGGCACGATCATCGCGGTCAAGGAGTTCAACGCGGAGGACGGCGACGACGAGCTCGGCTCGGGCGTCAACCGTCGCGTCGTGGTCTACATCGCCCAGAAGCGCAAGATCACCGAGGGCGACAAGCTCGCCGGCCGCCACGGCAACAAGGGTGTCATCGCCAAGATCCTCCCGATCGAGGACATGCCCTTCCTCGCCGACGGCACGCCGGTCGACGTCATCCTGAACCCGCTCGGCATCCCCGGCCGCATGAACTTCGGCCAGGTGCTGGAGACCCACCTCGGGTGGATCGCCAAGCAGGGCTGGAAGGTCGAGGGCAACCCCGAGTGGGCCGCCCATCTGCCCGAGAGCGCCCGTGAGGCCGCGCCCGGAACGAAGGTCGCCACGCCGGTGTTCGACGGTGCGTACGAGGAGGAGATCGCGGGTCTGCTCGACTCGACCAACCTCACGCGCGACGGCGAGCGCCTGATCGACTCGAGCGGAAAGGCCCTGCTGTTCGACGGCCGCTCCGGCGAGCCGTTCCCGGCACCCGTCTCGGTCGGCTACATGTACATCCTGAAGCTGCACCACCTCGTGGACGACAAGATCCACGCACGGTCGACCGGCCCGTACTCGATGATCACCCAGCAGCCGCTCGGTGGGAAGGCGCAGTTCGGCGGTCAGCGCTTCGGCGAGATGGAGGTGTGGGCCCTCGAGGCCTACGGTGCCGCCTACGCGCTGCAGGAGCTCCTCACGATCAAGTCCGACGACATCCTCGGCCGCGTCAAGGTGTACGAGGCCATCGTCAAGGGCGAGAACATCCAGGAGCCGGGCATCCCCGAGTCCTTCAAGGTGCTCATGAAGGAGATGCAGTCGCTCTGCCTGAACGTCGAGGTCCTCTCGGCGGACGGCACGGCGGTCAACCTTCGCGACACGGATGACGAGGCGTTCCGCGCGGCGGAAGAGCTCGGCATCAACATCTCCAGCCGGTTCGAGTCGTCGTCCATCGACGAGATCTGA
PROTEIN sequence
Length: 502
FDRSNQGTSYNQRVIVSAGDRIEAGEVIADGPATENGELALGKNLLVAFMTWEGHNFEDAIILSQDLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPDLLKDLDERGIVRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIAVKEFNAEDGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVIAKILPIEDMPFLADGTPVDVILNPLGIPGRMNFGQVLETHLGWIAKQGWKVEGNPEWAAHLPESAREAAPGTKVATPVFDGAYEEEIAGLLDSTNLTRDGERLIDSSGKALLFDGRSGEPFPAPVSVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDILGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTAVNLRDTDDEAFRAAEELGINISSRFESSSIDEI*