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SCN18_10_11_15_R3_B_scaffold_2658

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R3_B_scaffold_2658_1
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..432
DNA (432bp) protein (144aa)
rare lipoprotein A; K03642 rare lipoprotein A id=12494433 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rare lipoprotein A
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_2
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

446..1552
DNA (1107bp) protein (369aa)
serine-type D-ala-D-ala carboxypeptidase (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] id=12494434 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
serine-type D-ala-D-ala carboxypeptidase (EC:3.4.16.4)
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_3
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1549..2412
DNA (864bp) protein (288aa)
D-alanine transminase (EC:2.6.1.21)
cytochrome C550 n=1 Tax=Thiobacillus thioparus RepID=UPI0003744C26
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_4
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2409..2693
DNA (285bp) protein (95aa)
hypothetical protein; K09158 hypothetical protein id=12494171 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_5
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2735..3331
DNA (597bp) protein (199aa)
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=12494172 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipoate-protein ligase B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_6
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3381..4496
DNA (1116bp) protein (372aa)
anthranilate phosphoribosyltransferase-like protein id=12494173 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
anthranilate phosphoribosyltransferase-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_10_11_15_R3_B_scaffold_2658_7
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4493..4804
DNA (312bp) protein (104aa)
putative dioxygenase ferredoxin subunit; K05710 dioxygenase ferredoxin subunit id=12494174 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dioxygenase ferredoxin subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_8
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4900..5826
DNA (927bp) protein (309aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] id=12494175 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipoyl synthase
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_9
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5827..6612)
DNA (786bp) protein (262aa)
ABC-2 type transporter, NodJ; K09694 lipooligosaccharide transport system permease protein id=12494176 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-2 type transporter, NodJ
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_10_11_15_R3_B_scaffold_2658_10
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6767..7672)
DNA (906bp) protein (302aa)
ABC-2 type transporter ATPase; K09695 lipooligosaccharide transport system ATP-binding protein id=12494177 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-2 type transporter ATPase
ABC-2 type transporter ATPase {ECO:0000313|EMBL:AAZ96230.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_10_11_15_R3_B_scaffold_2658_11
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7666..8268)
DNA (603bp) protein (201aa)
hypothetical protein; K07018 id=12494178 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_12
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8291..8608)
DNA (318bp) protein (106aa)
putative ferredoxin 2fe-2s protein id=12494179 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ferredoxin 2fe-2s protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_13
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8601..8987)
DNA (387bp) protein (129aa)
hypothetical protein id=12494180 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_14
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9056..9679
DNA (624bp) protein (208aa)
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein id=12494181 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
polysaccharide export outer membrane protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_15
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9730..11265
DNA (1536bp) protein (512aa)
polysaccharide chain length determinant protein id=12494182 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
polysaccharide chain length determinant protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_16
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11274..12206
DNA (933bp) protein (311aa)
protein-tyrosine kinase id=12494183 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
protein-tyrosine kinase
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_17
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12049..13152)
DNA (1104bp) protein (368aa)
SCN18_10_11_15_R3_B_scaffold_2658_18
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13710..14744
DNA (1035bp) protein (345aa)
ATPase n=1 Tax=Thiobacillus thioparus RepID=UPI000381E924
ATPase
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_19
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14768..15781
DNA (1014bp) protein (338aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Thiobacillus thioparus RepID=UPI00037EF473
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_20
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15870..16616
DNA (747bp) protein (249aa)
polysaccharide deacetylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003751438
polysaccharide deacetylase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_21
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16619..17683
DNA (1065bp) protein (355aa)
hypothetical protein id=12495431 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_22
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17779..19002
DNA (1224bp) protein (408aa)
group 1 glycosyl transferase id=12495432 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
group 1 glycosyl transferase
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_23
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18999..20558
DNA (1560bp) protein (520aa)
hypothetical protein id=12495433 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_2658_24
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20555..21700
DNA (1146bp) protein (382aa)
group 1 glycosyl transferase id=12495434 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
group 1 glycosyl transferase
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_25
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21736..22677
DNA (942bp) protein (314aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase (Fragment) n=1 Tax=uncultured gamma proteobacterium RepID=H5SE38_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCN18_10_11_15_R3_B_scaffold_2658_26
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22674..23522
DNA (849bp) protein (283aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] id=12495435 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
asparagine synthase (EC:6.3.5.4)
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_2658_27
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23909..24292
DNA (384bp) protein (128aa)
group 1 glycosyl transferase id=12495436 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
group 1 glycosyl transferase
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 27 items

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