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SCN18_10_11_15_R3_B_scaffold_3875

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R3_B_scaffold_3875_1
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..214
DNA (213bp) protein (71aa)
hypothetical protein id=12493577 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_3875_2
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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279..2321
DNA (2043bp) protein (681aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=12493576 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_3875_3
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2418..2624
DNA (207bp) protein (69aa)
hypothetical protein id=12493575 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_3875_4
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2690..3346
DNA (657bp) protein (219aa)
outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein id=12493574 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
outer membrane lipoprotein carrier protein LolA
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_3875_5
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3343..4674
DNA (1332bp) protein (444aa)
recombination factor protein RarA; K07478 putative ATPase id=12493573 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
recombination factor protein RarA
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_3875_6
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4720..6024)
DNA (1305bp) protein (435aa)
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3); K11180 sulfite reductase, dissimilatory-type alpha subunit [EC:1.8.99.3] id=12493572 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_3875_7
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6176..6433
DNA (258bp) protein (86aa)
SpoVT/AbrB-like protein id=12493571 bin=THIO_HI species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SpoVT/AbrB-like protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
SCN18_10_11_15_R3_B_scaffold_3875_8
SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6430..6837
DNA (408bp) protein (136aa)
vapC2; nucleic acid-binding protein; K07062 id=12493570 bin=THIO_HI species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
nucleic acid-binding protein, contains PIN domain
Tax=RBG_16_Betaproteobacteria_56_24_curated
SCN18_10_11_15_R3_B_scaffold_3875_9
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6927..8120
DNA (1194bp) protein (398aa)
peptidase dimerisation domain-containing protein; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] id=12493569 bin=THIO_HI species=Burkholderia terrae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Peptidase dimerization domain-containing protein {ECO:0000313|EMBL:EIM98188.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
peptidase dimerisation domain-containing protein
SCN18_10_11_15_R3_B_scaffold_3875_10
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8160..10850
DNA (2691bp) protein (897aa)
patatin id=12493568 bin=THIO_HI species=Frankia sp. BCU110501 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=THIO_HI organism_group=Betaproteobacteria
patatin
Patatin {ECO:0000313|EMBL:ABW14909.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Displaying 10 items

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