ggKbase home page

SCN18_10_11_15_R3_B_scaffold_1030_25

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 26005..26514

Top 3 Functional Annotations

Value Algorithm Source
CheW protein; K02659 twitching motility protein PilI id=12495279 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 169.0
  • Bit_score: 346
  • Evalue 9.30e-93
chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 170.0
  • Bit_score: 276
  • Evalue 3.40e-72
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 159.0
  • Bit_score: 305
  • Evalue 3.30e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGCCAAGAAATTCAATCTGCGCGAATTTCAGACCCAGCTGTCACAACAGTTGCAGGCCGCTGCCAGCCGCGACAATTCCGGATCGCGGCTGGGCTTTCGCGTGGGCAATGCGAACTGGCTGGTGAGCCTGTCCGATACCGAAGAAGTGATTCCGGTACCGGCCATCGTCAAGGTGCCCGGTGCGCGTCGCTGGTTCCGCGGCGTCGCCAACATTCGCGGCAATCTGTATGCCGTGAGTGATTTCGCCGATTTCATGGGGCAGGGCGTGACGCCTGAACATGCCGATAGCCGCCTGCTGATTCCGCATCATGATTTCGGCGTGAACGCGGCACTGCTGGTCCGCAACACCCTGGGTCTCAAGAACATCAATCGTTACCAGCCGAGCGGCGCGCATGCGGCCCATCCCTGGGTTGCGCGCCAGTACGCGGATGAGACGGGTGCCGACTGGTGCGACATGGACTTCGGACAATTGCTTGGCGATGCCGAATTTCTCAAGGTCGAAGCATAG
PROTEIN sequence
Length: 170
MAKKFNLREFQTQLSQQLQAAASRDNSGSRLGFRVGNANWLVSLSDTEEVIPVPAIVKVPGARRWFRGVANIRGNLYAVSDFADFMGQGVTPEHADSRLLIPHHDFGVNAALLVRNTLGLKNINRYQPSGAHAAHPWVARQYADETGADWCDMDFGQLLGDAEFLKVEA*