ggKbase home page

SCN18_10_11_15_R3_B_scaffold_1030_26

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 26581..28689

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis sensory transducer; K02660 twitching motility protein PilJ id=12495280 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 702.0
  • Bit_score: 1304
  • Evalue 0.0
chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 707.0
  • Bit_score: 1137
  • Evalue 0.0
Chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ98502.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 707.0
  • Bit_score: 1137
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2109
ATGAACATGGCAATCACGATGAATGGCCTCAAGGGGCTGGCGGGCCGCATGACGGGGAAAAGTGGAAACGAACACACCACCCTGATCATGCAGACCGTGCGCAAGCTGGCGGACAAGGATCCCGGCAAGGCGCCCCTGATCGGCAGTCTGCCAGTCGAGAAGCAATATTTTTATACCGGTGGTGCCCTGATCGTTTCCCTGCTTCTGGCGGCCGGCTTCACCATCTACAGTTCGATCCAGCTTGATAACCGTACCGGCTACGAAAGACGGGCGGGCGAACTCAAGGTGCTGTCGCAGCGTCTGCCGCTGGCCGCCCAGCAGTCGGTGCTGGGTAATACCGCAGCGTTCAAGAAACTGGCGGCCGGCAAAGCAAGTTTCGAGACGACGCTCAAAGGCCTGACCGAGGGCGACGACACGATTCCCGCTTCCAGCGGTGCCGCCCGCATGACCCTGGAGAAGATCGACACGCAATGGCAGAAATTCAACCCGCAAGTCACCCAGATCCTGTCGCAGCAGAAAAACCTGGTAGCGATGAGTGCCAGTATCAAACGCATTAACAGCCTGAGCATGGATTTGCAGAAGGTGGCCGAACGGCTGGCCGGCCAGCTGGCGGATTCCGGAGCGGGCGTGCGTGAAGTGTCGCGTGCGAATCATCTGGCCATGCTGAGCCAGCGTTTGCCGAAGAACGCCAACCTGCTCTTGACGGCCGAGCTGATCGACCCCGCCGTCGTGACGCAACTGGAGAAGGACACGACTTCATTCCGGGATACCGTACAGGCATTGATGTCCGGCATCGCCAGCCGCAACGAAAGCAACCTGGCGACCCTGGAAGATCTTGGCAGCAACATGGGCGACATGGTCGAGGTCGTGGGCGCGGTGCTCGCCAATACGCAGCCGCTCATGCAGGCCAAGATATCGGCCAAAAACCTGTTCGCCGGCAGCGATGCGCTGCTTGAAAATACCGACCAGTTGTCGCAGGACTACCAGTCCGTGGGGGGCACCGGTTATCTGCTGGCGGCCCTGTTCGGCTTGTTGGCGATCGGTTCGCTGGTGATGCTGGGGCTGGTCAACATCAACGAGACCAAATCGCGGGCGCGCAGGAGCGAAGAGGAAAACGGCCGCAACCAGGAGGCGATTCTGCGCCTGATGGACGAACTGGGCGAATTGGCCGAGGGCAACCTCACGATCAACGCCAGCGTGACCGAGGATATCACCGGCGCGGTGGCCGACTCGATCAACTATACGGTCGAGGAATTGCGTACGCTGGTACGCGGGATCAACCATGCTACGCAACAAATGGATCAGGCCGCCGATCAGGCGGGCCAGGTATCCGATTCGCTGCAGCAGGCGGCACGCCGCCAGACTGCCGGCATCGAAGAAACTTCGGCCGCAGTCGTGAACCTGGCGCAGTCGGTGCAACAGGTATCGGGCAACGCGGCCGAATCCGCCCGGGTGGCGGAACAATCGCTGGCGGCAGCCGAAAAAGGCCAGCATGCAGTGGCCAACGCGATTTCCAGCATGAACGGCCTGCGCGAGCAGATTCAGGAAACGTCGAAGCGAATCAAGCGCCTGGGCGAATCCTCGCAGGAGATTGGCGAAATCGTCGAACTCATTTCCGACATTACCGAACAGACTAACGTGCTGGCGCTCAACGCCGCCATCCAGGCGGCTTCCGCGGGTGAGGCCGGACGCGGTTTCTCGGTGGTTGCGGAAGAAGTGCAGCGGCTGGCGGAACGCTCGGCCGATGCGACCAAGCAGATCGCCGCCATCGTGAAGACGATTCAGTCCGACACCCATGACACGGTGGCGGCGATGGAAGTCTCGACCCAGGGCGTGGTCGAAGGCGCCAAGCTGTCCGATGCCGCAGGCCAGACGCTGGCCGAGATCGGCGACGTGTCGAAGAAACTGGCCGGGCTGATCGCCGATATTTCCTCGGCCACGCAGAGTCAGGCCGAATCGACCGCCAAGGTGGCCGAAACCATGCAGGACATCAAATCCATTTCGGCGCAGACCAGCAGCGGTACGCAGCAAACCGCCGAGTCGATCGGCGGCATGAAGCAGCTGGCGCAGGATCTCAAGGGCTCGGTTGCAGGCTTCAAGCTTGCCTGA
PROTEIN sequence
Length: 703
MNMAITMNGLKGLAGRMTGKSGNEHTTLIMQTVRKLADKDPGKAPLIGSLPVEKQYFYTGGALIVSLLLAAGFTIYSSIQLDNRTGYERRAGELKVLSQRLPLAAQQSVLGNTAAFKKLAAGKASFETTLKGLTEGDDTIPASSGAARMTLEKIDTQWQKFNPQVTQILSQQKNLVAMSASIKRINSLSMDLQKVAERLAGQLADSGAGVREVSRANHLAMLSQRLPKNANLLLTAELIDPAVVTQLEKDTTSFRDTVQALMSGIASRNESNLATLEDLGSNMGDMVEVVGAVLANTQPLMQAKISAKNLFAGSDALLENTDQLSQDYQSVGGTGYLLAALFGLLAIGSLVMLGLVNINETKSRARRSEEENGRNQEAILRLMDELGELAEGNLTINASVTEDITGAVADSINYTVEELRTLVRGINHATQQMDQAADQAGQVSDSLQQAARRQTAGIEETSAAVVNLAQSVQQVSGNAAESARVAEQSLAAAEKGQHAVANAISSMNGLREQIQETSKRIKRLGESSQEIGEIVELISDITEQTNVLALNAAIQAASAGEAGRGFSVVAEEVQRLAERSADATKQIAAIVKTIQSDTHDTVAAMEVSTQGVVEGAKLSDAAGQTLAEIGDVSKKLAGLIADISSATQSQAESTAKVAETMQDIKSISAQTSSGTQQTAESIGGMKQLAQDLKGSVAGFKLA*