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SCN18_10_11_15_R3_B_scaffold_2675_23

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(16079..16621)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-); K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] id=12495382 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 370
  • Evalue 8.40e-100
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 310
  • Evalue 2.90e-82
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 310
  • Evalue 1.40e-81

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGTCGCGTCTTATTTTGTTCAACAAACCCTACGGCGTACTCAGCCAGTTCACCCCGGAAGGGCGCTGGCAGGGTTTGCAGGATCACCTCGCGCTTCCCGGCGTGTATGCAGCCGGCCGGCTGGATGCCGACAGCGAGGGCCTGCTGATTTTAACCGATGACGGTGCGCTCCAGCGCCGCATTGCCGATCCGGCATACAAACTTGTCAAAACCTACTGGGCGCAGGTCGAGGGCACGCCCGACGCGACCGCGCTGGAACCGCTGCGGCAGGGGGTTGACCTCGGCGATTTCGTCGCTCGGCCGGCACAGGCGCGCCTGATCGGCGAACCCGCCAGCCTGTGGCCGCGTCACCCGCCGATCCGATATCGGGCCAGCATCCCCACGGCCTGGATCGAACTCGCGATCAGCGAAGGCAAGAACCGGCAGGTACGGCGGATGACGGCGAAGATCGGCTTCCCCACGCTGCGGCTGATCCGTGTCGCCGTAGGCGACTGGAAACTGGGTCATCTGCAGCCCGGAGAATGGAAAGAACTGTATGTCTGA
PROTEIN sequence
Length: 181
VSRLILFNKPYGVLSQFTPEGRWQGLQDHLALPGVYAAGRLDADSEGLLILTDDGALQRRIADPAYKLVKTYWAQVEGTPDATALEPLRQGVDLGDFVARPAQARLIGEPASLWPRHPPIRYRASIPTAWIELAISEGKNRQVRRMTAKIGFPTLRLIRVAVGDWKLGHLQPGEWKELYV*