ggKbase home page

SCN18_10_11_15_R3_B_scaffold_2675_24

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 16664..16900

Top 3 Functional Annotations

Value Algorithm Source
isocitrate dehydrogenase (NADP) (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] id=12495383 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 4.40e-37
isocitrate dehydrogenase (NADP) (EC:1.1.1.42) similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 76.0
  • Bit_score: 149
  • Evalue 3.80e-34
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 79.0
  • Bit_score: 159
  • Evalue 1.80e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGAGCACACATATCCAGATTCCCGCCGCAGGAAAAAAAATCACCGTCAACGCCGACAACACCTTGAACGTGCCGGACACGCCCATCATTCCCTTCATCGAGGGCGACGGCACTGGCGTCGACATCACCCCGGCGATGCGCCGCGTGGTCGATGCGGCGGTGGCCAAGGCCTACGGCGGCAAGAAGCAGATCGCCTGGATGGAAGTATTTGCCGGCGAGAAGGCGGTCAAGGTCTAC
PROTEIN sequence
Length: 79
MSTHIQIPAAGKKITVNADNTLNVPDTPIIPFIEGDGTGVDITPAMRRVVDAAVAKAYGGKKQIAWMEVFAGEKAVKVY