ggKbase home page

SCN18_30_10_14_R4_P_scaffold_883

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_883_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
Sugar ABC transporter permease n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPH1_PUSST
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AEC20491.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCN18_30_10_14_R4_P_scaffold_883_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273..473)
DNA (201bp) protein (67aa)
SCN18_30_10_14_R4_P_scaffold_883_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(684..1439)
DNA (756bp) protein (252aa)
DsbA-like protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUE0_9PROT
Outer membrane protein {ECO:0000313|EMBL:GAN76011.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Outer membrane protein
SCN18_30_10_14_R4_P_scaffold_883_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1607..3049
DNA (1443bp) protein (481aa)
Gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:ABI61277.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABI61277.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Gamma-glutamyltranspeptidase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV75_GRABC
SCN18_30_10_14_R4_P_scaffold_883_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3076..3426
DNA (351bp) protein (117aa)
SCN18_30_10_14_R4_P_scaffold_883_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3431..4588
DNA (1158bp) protein (386aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFH13030.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFH13030.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase, class I/II n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RI38_9PROT
SCN18_30_10_14_R4_P_scaffold_883_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4892..5176
DNA (285bp) protein (95aa)
SCN18_30_10_14_R4_P_scaffold_883_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5439..7148
DNA (1710bp) protein (570aa)
SCN18_30_10_14_R4_P_scaffold_883_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7259..8350
DNA (1092bp) protein (364aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YNK0_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47334.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
nucleoside-diphosphate sugar epimerase
SCN18_30_10_14_R4_P_scaffold_883_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8392..9627)
DNA (1236bp) protein (412aa)
putative cytochrome c peroxidase transmembrane protein (EC:1.11.1.5)
Putative cytochrome c peroxidase transmembrane protein n=2 Tax=Ralstonia RepID=D8N1M5_RALSL
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:CDX41253.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCN18_30_10_14_R4_P_scaffold_883_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9755..11353
DNA (1599bp) protein (533aa)
acid phosphatase n=1 Tax=Burkholderia bryophila RepID=UPI00036E5286
acpA; acid phosphatase, Burkholderia-type family protein
Acid phosphatase {ECO:0000313|EMBL:ADN58400.1}; Flags: Precursor;; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
SCN18_30_10_14_R4_P_scaffold_883_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11448..12719
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037BD452
Amidase {ECO:0000313|EMBL:EHM03028.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
amidase
SCN18_30_10_14_R4_P_scaffold_883_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12961..13677
DNA (717bp) protein (239aa)
Metallophosphoesterase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTM3_ACICJ
Metallophosphoesterase {ECO:0000313|EMBL:EWY40287.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
metallophosphoesterase
SCN18_30_10_14_R4_P_scaffold_883_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13769..14677
DNA (909bp) protein (303aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148, ECO:0000313|EMBL:CAL76071.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Putative peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQ95_BRASO
SCN18_30_10_14_R4_P_scaffold_883_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14742..15278)
DNA (537bp) protein (179aa)
Smr family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPM3_GRABC
Smr family protein
Smr family protein {ECO:0000313|EMBL:AHJ64236.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R4_P_scaffold_883_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15387..16250)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI0003638A4E
putative oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R4_P_scaffold_883_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16525..17709)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036217C3
CoA-transferase {ECO:0000313|EMBL:ETR76211.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_883_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17825..18736)
DNA (912bp) protein (304aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CKF1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJN07629.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
SCN18_30_10_14_R4_P_scaffold_883_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18822..19712
DNA (891bp) protein (297aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:ABB06185.1}; EC=1.1.1.31 {ECO:0000313|EMBL:ABB06185.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39MY1_BURS3
SCN18_30_10_14_R4_P_scaffold_883_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19769..22204)
DNA (2436bp) protein (812aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJB94407.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
PAS/PAC sensor hybrid histidine kinase
SCN18_30_10_14_R4_P_scaffold_883_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22458..23234
DNA (777bp) protein (259aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000313|EMBL:ABQ30035.1}; EC=2.5.1.15 {ECO:0000313|EMBL:ABQ30035.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Dihydropteroate synthase n=2 Tax=Acidiphilium RepID=A5FWQ3_ACICJ
SCN18_30_10_14_R4_P_scaffold_883_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23303..24688
DNA (1386bp) protein (462aa)
Phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Phosphoglucosamine mutase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=GLMM_GRABC
SCN18_30_10_14_R4_P_scaffold_883_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24688..25515
DNA (828bp) protein (276aa)
Hydroxymethylpyrimidine phosphate kinase ThiD n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H1C7_9PROT
Hydroxymethylpyrimidine phosphate kinase ThiD {ECO:0000313|EMBL:EKV31367.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
phosphomethylpyrimidine kinase
SCN18_30_10_14_R4_P_scaffold_883_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25574..26248)
DNA (675bp) protein (225aa)
Transcriptional regulator n=1 Tax=Burkholderia sp. BT03 RepID=J2H4E6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGE07439.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
bacterial regulatory s, tetR family protein
SCN18_30_10_14_R4_P_scaffold_883_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26326..26739)
DNA (414bp) protein (138aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ICP1_9BRAD
2Fe-2S ferredoxin {ECO:0000313|EMBL:ETR77282.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ferredoxin
SCN18_30_10_14_R4_P_scaffold_883_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26927..28051
DNA (1125bp) protein (375aa)
Extracellular ligand-binding receptor n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWR5_METNO
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ50071.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
extracellular ligand-binding receptor
SCN18_30_10_14_R4_P_scaffold_883_27
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28077..28940
DNA (864bp) protein (288aa)
putative High-affinity branched-chain amino acid transport system permease protein id=14628110 bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter permease
Tax=RBG_16_Acidobacteria_68_9_curated
SCN18_30_10_14_R4_P_scaffold_883_28
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28953..29810
DNA (858bp) protein (286aa)
putative ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); branched-chain amino acid transport protein id=14628109 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
Tax=CSP1_6_Rokubacteria
Displaying 28 items

View Taxonomy