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SCN18_30_10_14_R4_P_scaffold_3524

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_3524_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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443..2395
DNA (1953bp) protein (651aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Periplasmic sensor hybrid histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q216A8_RHOPB
periplasmic sensor hybrid histidine kinase
SCN18_30_10_14_R4_P_scaffold_3524_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2431..2838)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSV3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM27045.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_3524_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2867..3727)
DNA (861bp) protein (287aa)
Transcriptional regulator, AraC family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTS7_ACICJ
AraC protein, arabinose-binding/dimerisation
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABQ29009.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCN18_30_10_14_R4_P_scaffold_3524_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3783..5015)
DNA (1233bp) protein (411aa)
Putative oxidoreductase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EAY4_BRASB
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:ABQ33328.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R4_P_scaffold_3524_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5075..5977)
DNA (903bp) protein (301aa)
fatty acid hydroxylase n=1 Tax=Methylobacterium sp. 77 RepID=UPI00035F0C83
Fatty acid hydroxylase {ECO:0000313|EMBL:EIZ85301.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
sterol desaturase
SCN18_30_10_14_R4_P_scaffold_3524_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6363..8792
DNA (2430bp) protein (810aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000381F1D6
DEAD/H associated domain protein {ECO:0000313|EMBL:ABQ30819.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
DEAD/DEAH box helicase
SCN18_30_10_14_R4_P_scaffold_3524_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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8795..9166
DNA (372bp) protein (124aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZK5_9PROT
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EHM01523.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative methylated DNA-protein cysteine methyltransferase
SCN18_30_10_14_R4_P_scaffold_3524_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9303..10160)
DNA (858bp) protein (286aa)
Amino acid ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JMT3_AGRRK
amino acid ABC transporter
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAJ92113.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCN18_30_10_14_R4_P_scaffold_3524_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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10180..11361
DNA (1182bp) protein (394aa)
mandelate racemase/muconate lactonizing enzyme, N-terminal domain-containing protein 1 (EC:4.2.1.-)
Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYM8_9BURK
Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:EON12367.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCN18_30_10_14_R4_P_scaffold_3524_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11415..12326
DNA (912bp) protein (304aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Aminotransferase class IV {ECO:0000313|EMBL:KFN51584.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Putative aminotransferase id=2598357 bin=GWF1_Xanthomonadales_69_6 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCN18_30_10_14_R4_P_scaffold_3524_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12404..13087
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035C45B6
Metallophosphoesterase {ECO:0000313|EMBL:GAN53799.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
Putative ICC-like phosphoesterase
SCN18_30_10_14_R4_P_scaffold_3524_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13096..13542
DNA (447bp) protein (149aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XX93_9RHIZ
epoxide hydrolase protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 12 items

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