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SCN18_30_10_14_R4_P_scaffold_4738

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_4738_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..218)
DNA (216bp) protein (72aa)
GTPase CgtA n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237DD07
cgtA; GTP-binding protein CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
SCN18_30_10_14_R4_P_scaffold_4738_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(290..559)
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=2 Tax=Acidiphilium RepID=RL27_ACICJ
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
rpmA; 50S ribosomal protein L27
SCN18_30_10_14_R4_P_scaffold_4738_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(566..1012)
DNA (447bp) protein (149aa)
50S ribosomal protein L21 n=2 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RL21_GRABC
LSU ribosomal protein L21P
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R4_P_scaffold_4738_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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1426..2667
DNA (1242bp) protein (414aa)
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JHM1_AGRRK
transcriptional regulator
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAJ93541.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCN18_30_10_14_R4_P_scaffold_4738_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2701..3927
DNA (1227bp) protein (409aa)
Secretion protein HlyD family protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8P2_HYPSM
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:CCB63620.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_30_10_14_R4_P_scaffold_4738_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3924..5498
DNA (1575bp) protein (525aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELX8_METSB
Major facilitator transporter {ECO:0000313|EMBL:EWY39717.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
major facilitator superfamily protein
SCN18_30_10_14_R4_P_scaffold_4738_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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5495..7096
DNA (1602bp) protein (534aa)
Monovalent cation:H+ antiporter, CPA1 family n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2Y4_AZOS1
monovalent cation:H+ antiporter, CPA1 family
Monovalent cation:H+ antiporter, CPA1 family {ECO:0000313|EMBL:BAI75154.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCN18_30_10_14_R4_P_scaffold_4738_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7123..8043)
DNA (921bp) protein (307aa)
Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2II29_BEII9
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB94612.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R4_P_scaffold_4738_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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8166..8546
DNA (381bp) protein (127aa)
Pirin-like protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D5X3_SPHYA
Pirin {ECO:0000313|EMBL:KHA64174.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
pirin
Displaying 9 items

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