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SCN18_30_10_14_R4_P_scaffold_2047

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_2047_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..611
DNA (609bp) protein (203aa)
Putative bacteriophage protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BBR9_RALP1
bacteriophage protein
Putative bacteriophage protein {ECO:0000313|EMBL:ACS63525.1}; Flags: Precursor;; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCN18_30_10_14_R4_P_scaffold_2047_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(835..1752)
DNA (918bp) protein (306aa)
SCN18_30_10_14_R4_P_scaffold_2047_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1804..2769)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q5B8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR21300.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCN18_30_10_14_R4_P_scaffold_2047_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3829..4221
DNA (393bp) protein (131aa)
SCN18_30_10_14_R4_P_scaffold_2047_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4218..4592
DNA (375bp) protein (125aa)
SCN18_30_10_14_R4_P_scaffold_2047_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4589..5035
DNA (447bp) protein (149aa)
SCN18_30_10_14_R4_P_scaffold_2047_trna_1
unknown

Not on your lists

comp(5294..5367)
DNA (74bp)
transferRNA Arg
SCN18_30_10_14_R4_P_scaffold_2047_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5412..6392)
DNA (981bp) protein (327aa)
NADP-dependent oxidoreductase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FACF1D
aldo/keto reductase
Putative oxido-reductase {ECO:0000313|EMBL:CAE27095.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCN18_30_10_14_R4_P_scaffold_2047_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6461..6829)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z225_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS87439.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCN18_30_10_14_R4_P_scaffold_2047_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6885..8078
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1TUZ6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KFC79310.1}; TaxID=910964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Ewingella.;" source="Ewingella americana ATCC 33852.;"
mandelate racemase/muconate lactonizing protein
SCN18_30_10_14_R4_P_scaffold_2047_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8057..8527)
DNA (471bp) protein (157aa)
5'-methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
5'-methylthioadenosine nucleosidase {ECO:0000313|EMBL:ABI63305.1}; EC=3.2.2.16 {ECO:0000313|EMBL:ABI63305.1};; EC=3.2.2.9 {ECO:0000313|EMBL:ABI63305.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
5'-methylthioadenosine nucleosidase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPE7_GRABC
SCN18_30_10_14_R4_P_scaffold_2047_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9004..10941)
DNA (1938bp) protein (646aa)
Squalene--hopene cyclase (EC:5.4.99.17)
Squalene--hopene cyclase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQ97_GRABC
Squalene--hopene cyclase {ECO:0000313|EMBL:GAN78434.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R4_P_scaffold_2047_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10962..12227)
DNA (1266bp) protein (422aa)
Amine oxidase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1A7_ACIMA
Amine oxidase {ECO:0000313|EMBL:KDM67260.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
amine oxidase
SCN18_30_10_14_R4_P_scaffold_2047_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12570..12992)
DNA (423bp) protein (141aa)
Uncharacterized conserved protein UCP032025 n=3 Tax=Acidiphilium RepID=A5FZY6_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDM68107.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCN18_30_10_14_R4_P_scaffold_2047_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13147..14130
DNA (984bp) protein (328aa)
Esterase, PHB depolymerase family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FT39_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:KJV09770.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
PHB depolymerase family esterase
SCN18_30_10_14_R4_P_scaffold_2047_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14213..14554)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00036F2E6E
Uncharacterized protein {ECO:0000313|EMBL:GAN77401.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_2047_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14580..15161)
DNA (582bp) protein (194aa)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2M3_9PROT
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EHL99606.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
3-hydroxyacyl-CoA dehydrogenase
SCN18_30_10_14_R4_P_scaffold_2047_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15312..16052)
DNA (741bp) protein (247aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2M2_9PROT
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EHL99605.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
short-chain dehydrogenase/reductase SDR
SCN18_30_10_14_R4_P_scaffold_2047_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16127..17104
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YK23_9PROT
ABC transporter nitrate/sulfonate/bicarbonate permease {ECO:0000313|EMBL:GAN80177.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
SCN18_30_10_14_R4_P_scaffold_2047_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17475..18299
DNA (825bp) protein (275aa)
ABC transporter related protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWS0_ACICJ
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABQ30052.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCN18_30_10_14_R4_P_scaffold_2047_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18296..19072
DNA (777bp) protein (259aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Acidiphilium RepID=F7S5T6_9PROT
putative ABC transporter permease
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EGO95482.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCN18_30_10_14_R4_P_scaffold_2047_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19109..19861
DNA (753bp) protein (251aa)
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:KGB20662.1}; EC=4.2.1.70 {ECO:0000313|EMBL:KGB20662.1};; TaxID=104102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis.;"
Ribosomal RNA large subunit 23S rRNA pseudouridine synthase A n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VCQ8_9PROT
RNA pseudouridine synthase
SCN18_30_10_14_R4_P_scaffold_2047_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19858..21282
DNA (1425bp) protein (475aa)
Phospholipase C 3 n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S3W6_9PROT
Phospholipase C 3 {ECO:0000313|EMBL:EGG78500.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
phosphoesterase
SCN18_30_10_14_R4_P_scaffold_2047_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21461..21634
DNA (174bp) protein (58aa)
Rubrerythrin n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VW1_RHOFD
rubrerythrin
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
SCN18_30_10_14_R4_P_scaffold_2047_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21627..21848
DNA (222bp) protein (74aa)
rubrerythrin n=1 Tax=Methyloferula stellata RepID=UPI00036B79C2
rubrerythrin
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCN18_30_10_14_R4_P_scaffold_2047_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21910..23247
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003766683
Anaerobic glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:EKE78351.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Anaerobic glycerol-3-phosphate dehydrogenase subunit C
SCN18_30_10_14_R4_P_scaffold_2047_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23262..23852
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QVF6_METTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ05933.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCN18_30_10_14_R4_P_scaffold_2047_27
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24216..24800
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IDS9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF81805.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
TetR family transcriptional regulator
SCN18_30_10_14_R4_P_scaffold_2047_28
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24815..26281
DNA (1467bp) protein (489aa)
Putative efflux protein, MATE family n=1 Tax=Acidovorax sp. CF316 RepID=J1EKY2_9BURK
mate efflux family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_30_10_14_R4_P_scaffold_2047_29
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26439..27608)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZG79_GLUDA
Uncharacterized protein {ECO:0000313|EMBL:GAJ28693.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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