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SCN18_30_10_14_R4_P_scaffold_2385

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_2385_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..815)
DNA (813bp) protein (271aa)
Cobaltochelatase, CobT subunit {ECO:0000313|EMBL:EFH13051.1}; EC=6.6.1.2 {ECO:0000313|EMBL:EFH13051.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
cobaltochelatase cobT subunit (EC:6.6.1.2)
Cobaltochelatase, CobT subunit n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RI22_9PROT
SCN18_30_10_14_R4_P_scaffold_2385_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1158..2174)
DNA (1017bp) protein (339aa)
Cobaltochelatase cobS subunit (EC:6.6.1.2)
Cobaltochelatase cobS subunit n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUH3_GRABC
Cobaltochelatase cobS subunit {ECO:0000313|EMBL:GAN76956.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R4_P_scaffold_2385_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2365..2871)
DNA (507bp) protein (169aa)
Molecular chaperones (DnaJ family) n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUH4_GRABC
Heat shock protein DnaJ {ECO:0000313|EMBL:GAN76957.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Molecular chaperones (DnaJ family)
SCN18_30_10_14_R4_P_scaffold_2385_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2888..3355
DNA (468bp) protein (156aa)
BolA-like protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RI19_9PROT
BolA-like protein {ECO:0000313|EMBL:EFH13048.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_2385_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3503..3967
DNA (465bp) protein (155aa)
AsnC family transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XUM2_9PROT
AsnC family transcriptional regulator {ECO:0000313|EMBL:EKN00300.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
AsnC family transcriptional regulator
SCN18_30_10_14_R4_P_scaffold_2385_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4013..4120)
DNA (108bp) protein (36aa)
Cyd operon protein YbgT n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q4N9_METSZ
Cyd operon protein YbgT
Cyd operon protein YbgT {ECO:0000313|EMBL:CCJ07699.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCN18_30_10_14_R4_P_scaffold_2385_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4176..5249)
DNA (1074bp) protein (358aa)
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WE34_DELAC
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EPD37556.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
cydB; cytochrome d ubiquinol oxidase subunit II
SCN18_30_10_14_R4_P_scaffold_2385_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5262..6818)
DNA (1557bp) protein (519aa)
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0Q0_9PROT
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:EGY00904.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
cydA; cytochrome bd-I oxidase subunit I
SCN18_30_10_14_R4_P_scaffold_2385_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6824..7045)
DNA (222bp) protein (74aa)
SCN18_30_10_14_R4_P_scaffold_2385_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7360..8229
DNA (870bp) protein (290aa)
D-amino-acid transaminase {ECO:0000313|EMBL:EFH10571.1}; EC=2.6.1.21 {ECO:0000313|EMBL:EFH10571.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
D-amino acid aminotransferase (EC:2.6.1.21)
D-amino-acid transaminase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQ45_9PROT
SCN18_30_10_14_R4_P_scaffold_2385_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8256..9206
DNA (951bp) protein (317aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured Chloroflexi bacterium HF0200_06I16 RepID=E0XTZ6_9CHLR
luciferase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R4_P_scaffold_2385_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9282..10919
DNA (1638bp) protein (546aa)
Flp pilus assembly protein TadD n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VY09_9BRAD
Flp pilus assembly protein TadD {ECO:0000313|EMBL:EJN11167.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_2385_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10900..11943)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ7_GRABC
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ61947.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R4_P_scaffold_2385_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11974..12726)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000382D1AA
Uncharacterized protein {ECO:0000313|EMBL:ETX02580.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_2385_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12741..13229)
DNA (489bp) protein (163aa)
Putative regulator protein n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HE67_GLUDA
regulator protein
Putative regulator protein {ECO:0000313|EMBL:CAP55191.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_30_10_14_R4_P_scaffold_2385_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13275..13754
DNA (480bp) protein (160aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hisL; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000360DA3F
SCN18_30_10_14_R4_P_scaffold_2385_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13699..14841
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036B785E
CobW/P47K family protein {ECO:0000313|EMBL:EFH09923.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
cobalamin synthesis protein/P47K
SCN18_30_10_14_R4_P_scaffold_2385_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15460..16023
DNA (564bp) protein (188aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Lipid-A-disaccharide synthase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUG0_9PROT
lpxB; lipid-A-disaccharide synthase
SCN18_30_10_14_R4_P_scaffold_2385_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16353..17804)
DNA (1452bp) protein (484aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14)
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A94006
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R4_P_scaffold_2385_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18006..20450)
DNA (2445bp) protein (815aa)
glutamate synthase (NADH) large subunit (EC:1.4.1.14)
Glutamate synthase (NADH) large subunit n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2X0_SPHWW
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 20 items

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