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SCN18_30_10_14_R4_P_scaffold_1173

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1173_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109..1101)
DNA (993bp) protein (331aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YN06_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:KGM34058.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aldo/keto reductase
SCN18_30_10_14_R4_P_scaffold_1173_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1172..1579)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000372EB9D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJW10767.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCN18_30_10_14_R4_P_scaffold_1173_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1785..3233)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037EA0BE
dihydropyrimidinase
Dihydropyrimidinase {ECO:0000313|EMBL:ACA16983.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_30_10_14_R4_P_scaffold_1173_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3245..3568
DNA (324bp) protein (108aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YYY6_9GAMM
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:EIC21913.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
hydrogenase assembly chaperone HypC/HupF
SCN18_30_10_14_R4_P_scaffold_1173_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3561..3899
DNA (339bp) protein (113aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Thiocapsa marina 5811 RepID=F9UCG6_9GAMM
hydrogenase nickel incorporation protein HypA
Tax=RBG_16_Gamma2_65_34_curated
SCN18_30_10_14_R4_P_scaffold_1173_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3892..4608
DNA (717bp) protein (239aa)
hydrogenase nickel incorporation protein HypB n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035DAFFE
hydrogenase nickel incorporation protein HypB
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCN18_30_10_14_R4_P_scaffold_1173_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4669..5766
DNA (1098bp) protein (366aa)
Protein required for maturation of hydrogenases n=1 Tax=mine drainage metagenome RepID=E6QTH5_9ZZZZ
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:KFZ89737.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hydrogenase formation HypD protein
SCN18_30_10_14_R4_P_scaffold_1173_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5847..8276
DNA (2430bp) protein (810aa)
hydrogenase maturation protein HypF n=1 Tax=Methylococcus capsulatus RepID=UPI0003603A2D
hydrogenase maturation protein HypF
Tax=RBG_16_Gamma2_65_34_curated
SCN18_30_10_14_R4_P_scaffold_1173_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8267..9280
DNA (1014bp) protein (338aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FVC4_ACICJ
hydrogenase expression/formation protein HypE
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCN18_30_10_14_R4_P_scaffold_1173_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9342..9785)
DNA (444bp) protein (148aa)
hydrogenase maturation protease n=1 Tax=Methylocystis rosea RepID=UPI0003782BDA
hydrogenase maturation protease
Hydrogenase maturation protease {ECO:0000313|EMBL:CCJ06295.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCN18_30_10_14_R4_P_scaffold_1173_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9819..11123)
DNA (1305bp) protein (435aa)
Nickel-dependent hydrogenase large subunit n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QFF8_METSZ
Nickel-dependent hydrogenase large subunit
Nickel-dependent hydrogenase large subunit {ECO:0000313|EMBL:CCJ06296.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCN18_30_10_14_R4_P_scaffold_1173_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11113..11895)
DNA (783bp) protein (261aa)
oxidoreductase n=1 Tax=Methylocystis parvus RepID=UPI00035F6470
NADH ubiquinone oxidoreductase 20 kDa subunit
NADH ubiquinone oxidoreductase 20 kDa subunit {ECO:0000313|EMBL:ACY49462.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
SCN18_30_10_14_R4_P_scaffold_1173_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11900..12751)
DNA (852bp) protein (284aa)
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HQS0_9PROT
Oxidoreductase FAD/NAD(P)-binding protein {ECO:0000313|EMBL:EKV30776.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
putative dihydroorotate dehydrogenase(electron transfer subunit)
SCN18_30_10_14_R4_P_scaffold_1173_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12754..13248)
DNA (495bp) protein (165aa)
Cyclic nucleotide-binding protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMW3_9BRAD
conserved protein of unknown function[Include cyclic nucleotide-binding domain]
Uncharacterized protein {ECO:0000313|EMBL:CCQ74982.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
SCN18_30_10_14_R4_P_scaffold_1173_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13270..14493)
DNA (1224bp) protein (408aa)
Cytochrome c3 hydrogenase alpha (Or beta) chain n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ21_9GAMM
Cytochrome c3 hydrogenase alpha (Or beta) chain {ECO:0000313|EMBL:EAR22176.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
4Fe-4S ferredoxin
SCN18_30_10_14_R4_P_scaffold_1173_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14691..15455
DNA (765bp) protein (255aa)
CDP-diacylglycerol diphosphatase (EC:3.6.1.26)
CDP-diacylglycerol diphosphatase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I746_MYCRH
CDP-diacylglycerol diphosphatase {ECO:0000313|EMBL:KDR26022.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
SCN18_30_10_14_R4_P_scaffold_1173_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15458..16450
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003610049
ampR; transcriptional regulator protein (activator)
Transcriptional regulator {ECO:0000313|EMBL:EJK86681.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCN18_30_10_14_R4_P_scaffold_1173_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16431..17816)
DNA (1386bp) protein (462aa)
Aminotransferase, class III n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMZ6_9PROT
Aminotransferase {ECO:0000313|EMBL:EWY40164.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
class III aminotransferase
SCN18_30_10_14_R4_P_scaffold_1173_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17830..19443)
DNA (1614bp) protein (538aa)
ABC transporter substrate-binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TW18_TISMK
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AFK56956.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_30_10_14_R4_P_scaffold_1173_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19440..21158)
DNA (1719bp) protein (573aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=3222463 bin=GWC2_Methylomirabilis_70_16 species=halophilic archaeon DL31 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_30_10_14_R4_P_scaffold_1173_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21155..22987)
DNA (1833bp) protein (611aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=3222461 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_30_10_14_R4_P_scaffold_1173_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23033..23218
DNA (186bp) protein (62aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=3222461 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 22 items

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