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SCN18_30_10_14_R4_P_scaffold_1439

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1439_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145..984
DNA (840bp) protein (280aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
mutM; formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037BBFB9
SCN18_30_10_14_R4_P_scaffold_1439_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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1171..1947
DNA (777bp) protein (259aa)
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E9BF3D
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAN76655.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R4_P_scaffold_1439_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2046..3245
DNA (1200bp) protein (400aa)
Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVI9_9PROT
Cyclic diguanylate phosphodiesterase domain protein {ECO:0000313|EMBL:EHM02952.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
response regulator
SCN18_30_10_14_R4_P_scaffold_1439_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3296..4510)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003668C31
Alcohol dehydrogenase iron-containing {ECO:0000313|EMBL:GAN75942.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
iron-containing alcohol dehydrogenase
SCN18_30_10_14_R4_P_scaffold_1439_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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4911..6224
DNA (1314bp) protein (438aa)
Divalent metal cation transporter MntH n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EC78_BRASB
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
mntH; manganese/divalent cation transport protein
SCN18_30_10_14_R4_P_scaffold_1439_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6238..6723
DNA (486bp) protein (162aa)
Iron dependent repressor n=3 Tax=Acidiphilium RepID=A5G1Y6_ACICJ
manganese transport regulator MntR
DtxR family transcriptional regulator {ECO:0000313|EMBL:BAJ82352.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCN18_30_10_14_R4_P_scaffold_1439_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6800..7939)
DNA (1140bp) protein (380aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Alanine dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWM5_9PROT
ald; alanine dehydrogenase
SCN18_30_10_14_R4_P_scaffold_1439_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8006..9268
DNA (1263bp) protein (421aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YP87_9BRAD
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIF65794.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1439_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9416..10513
DNA (1098bp) protein (366aa)
Catalase-related peroxidase {ECO:0000256|PIRNR:PIRNR000296}; EC=1.11.1.- {ECO:0000256|PIRNR:PIRNR000296};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Catalase-related peroxidase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q143G2_BURXL
catalase family protein
SCN18_30_10_14_R4_P_scaffold_1439_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10510..11055
DNA (546bp) protein (182aa)
Cytochrome b561 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CIP4_9RHIZ
Cytochrome B561 {ECO:0000313|EMBL:KGM30840.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
prokaryotic cytochrome b561 family protein
SCN18_30_10_14_R4_P_scaffold_1439_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11228..11467
DNA (240bp) protein (80aa)
Probable hemagglutinin-related protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VE15_9RHOB
Probable hemagglutinin-related protein {ECO:0000313|EMBL:EAQ13754.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
cell wall binding repeat-containing protein
SCN18_30_10_14_R4_P_scaffold_1439_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11471..12664)
DNA (1194bp) protein (398aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSG5_TISMK
yfdE; L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:AFK55703.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_30_10_14_R4_P_scaffold_1439_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12842..13678
DNA (837bp) protein (279aa)
Beta-lactamase domain protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G226_ACICJ
beta-lactamase domain-containing protein
Beta-lactamase-like protein {ECO:0000313|EMBL:KFC64665.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_30_10_14_R4_P_scaffold_1439_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14039..14497)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000360202F
Uncharacterized protein {ECO:0000313|EMBL:KJC60790.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1439_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14505..16103)
DNA (1599bp) protein (533aa)
choline dehydrogenase n=1 Tax=Martelella mediterranea RepID=UPI00036B9F8F
Choline dehydrogenase {ECO:0000313|EMBL:KGE02431.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1439_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16344..17972
DNA (1629bp) protein (543aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0F8_9PROT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EHM00980.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
oligopeptide ABC transporter substrate-binding protein
SCN18_30_10_14_R4_P_scaffold_1439_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17965..19071
DNA (1107bp) protein (369aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGR9_9PROT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH13480.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
oppD; oligopeptide transporter ATP-binding component
Displaying 17 items

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