ggKbase home page

SCN18_30_10_14_R4_P_scaffold_1495

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1495_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..243
DNA (243bp) protein (81aa)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:EEE44148.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EEE44148.1};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4Z8_9RHOB
fixN; cbb3-type cytochrome c oxidase subunit I
SCN18_30_10_14_R4_P_scaffold_1495_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248..964
DNA (717bp) protein (239aa)
ccoO; cytochrome c oxidase, cbb3-type subunit II (EC:1.9.3.1)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000372470E
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EGX99999.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCN18_30_10_14_R4_P_scaffold_1495_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

977..1129
DNA (153bp) protein (51aa)
SCN18_30_10_14_R4_P_scaffold_1495_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1142..2011
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036FFC8B
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
cbb3-type cytochrome c oxidase subunit III
SCN18_30_10_14_R4_P_scaffold_1495_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2027..3538
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000367A10C
Nitrogen fixation protein FixG {ECO:0000313|EMBL:KJV10512.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
fixG; nitrogen fixation protein fixG
SCN18_30_10_14_R4_P_scaffold_1495_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3544..4041
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000379F74E
fixH; nitrogen fixation protein fixH
Nitrogen fixation protein fixH, putative {ECO:0000313|EMBL:ACI98682.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_30_10_14_R4_P_scaffold_1495_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4053..6458
DNA (2406bp) protein (802aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035E1DDF
Cation transport ATPase {ECO:0000313|EMBL:EKE78713.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
fixI; cation-exporting ATPase
SCN18_30_10_14_R4_P_scaffold_1495_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6455..6601
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TXP0_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KJV09014.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1495_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6763..8229)
DNA (1467bp) protein (489aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036D5B65
glpD; glycerol-3-phosphate dehydrogenase
SCN18_30_10_14_R4_P_scaffold_1495_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8226..8942)
DNA (717bp) protein (239aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHC1_9RHOB
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EJW13366.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1495_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9058..9480)
DNA (423bp) protein (141aa)
Putative peptidase, M20/M25/M40 family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGR3_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:GAN78073.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative peptidase, M20/M25/M40 family
SCN18_30_10_14_R4_P_scaffold_1495_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9682..10452)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000315AE0E
Uncharacterized protein {ECO:0000313|EMBL:GAN78073.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1495_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10497..11123)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BS47_GRABC
Transcriptional regulator, TetR family protein
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AHJ63349.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R4_P_scaffold_1495_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11245..12555
DNA (1311bp) protein (437aa)
primase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035EAEA8
Uncharacterized protein {ECO:0000313|EMBL:KKB63425.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
secretion protein HlyD family protein
SCN18_30_10_14_R4_P_scaffold_1495_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12558..14084
DNA (1527bp) protein (509aa)
EmrB/QacA family drug resistance transporter n=1 Tax=Acidiphilium sp. PM RepID=F7S6J9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKB63426.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
emrB; multidrug resistance protein
SCN18_30_10_14_R4_P_scaffold_1495_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14116..15663
DNA (1548bp) protein (516aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IF81_BEII9
Secretion system type I outer membrane RND efflux pump lipoprotein NodT {ECO:0000313|EMBL:GAN78072.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
RND efflux system outer membrane lipoprotein
SCN18_30_10_14_R4_P_scaffold_1495_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15801..17048
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DCBE4F
Uncharacterized protein {ECO:0000313|EMBL:EFG84431.1}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1495_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17124..17888
DNA (765bp) protein (255aa)
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A873_9PROT
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EHL96040.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
WecB/TagA/CpsF family glycosyl transferase
SCN18_30_10_14_R4_P_scaffold_1495_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17875..18111)
DNA (237bp) protein (79aa)
Displaying 19 items

View Taxonomy