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SCN18_30_10_14_R4_P_scaffold_1505

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1505_1
unknown

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comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

SCN18_30_10_14_R4_P_scaffold_1505_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(193..723)
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=UPI000173B74B
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
rplJ; 50S ribosomal protein L10
SCN18_30_10_14_R4_P_scaffold_1505_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1112..1801)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YVY4_9PROT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
rplA; 50S ribosomal protein L1
SCN18_30_10_14_R4_P_scaffold_1505_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1806..2240)
DNA (435bp) protein (145aa)
50S ribosomal protein L11 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YWK5_9PROT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
rplK; 50S ribosomal protein L11
SCN18_30_10_14_R4_P_scaffold_1505_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2402..2668)
DNA (267bp) protein (89aa)
SCN18_30_10_14_R4_P_scaffold_1505_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3049..4752
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3K7_ACIMA
Pectin lyase parallel beta-helix repeat-containing {ECO:0000313|EMBL:GAN79176.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1505_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4843..6213
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037AFAFF
Ethanolamine ammonia lyase large subunit {ECO:0000313|EMBL:KFZ89912.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
ethanolamine ammonia-lyase
SCN18_30_10_14_R4_P_scaffold_1505_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6338..7063
DNA (726bp) protein (242aa)
Ethanolamine ammonia-lyase light chain {ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|SAAS:SAAS00064958};; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
eutC; ethanolamine ammonia-lyase small subunit (EC:4.3.1.7)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000370EC04
SCN18_30_10_14_R4_P_scaffold_1505_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7140..8018)
DNA (879bp) protein (293aa)
transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035E79DC
Uncharacterized protein {ECO:0000313|EMBL:EJZ32552.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
LysR family transcriptional regulator
SCN18_30_10_14_R4_P_scaffold_1505_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8210..10003
DNA (1794bp) protein (598aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
isovaleryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000360D349
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:ETR78740.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_30_10_14_R4_P_scaffold_1505_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10261..11862
DNA (1602bp) protein (534aa)
Maltodextrin glucosidase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UF28_9RHOB
Alpha-amylase {ECO:0000313|EMBL:KFG67712.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
alpha amylase
SCN18_30_10_14_R4_P_scaffold_1505_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12021..13685
DNA (1665bp) protein (555aa)
trehalose synthase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037944A7
Glycosidase {ECO:0000313|EMBL:EHR06531.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
putative trehalose synthase protein
SCN18_30_10_14_R4_P_scaffold_1505_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13990..15759
DNA (1770bp) protein (590aa)
monooxygenase n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI0003817F85
Monooxygenase {ECO:0000313|EMBL:ETR78572.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
monooxygenase
SCN18_30_10_14_R4_P_scaffold_1505_trna_1
unknown

Not on your lists

comp(16027..16099)
DNA (73bp)
transferRNA Glu
SCN18_30_10_14_R4_P_scaffold_1505_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16187..17956)
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003059188
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EHM03504.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
single-stranded-DNA-specific exonuclease RecJ
SCN18_30_10_14_R4_P_scaffold_1505_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17981..18301)
DNA (321bp) protein (107aa)
glpX; fructose-1,6-bisphosphatase class II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=3 Tax=Acidiphilium RepID=A5FY26_ACICJ
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Displaying 16 items

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