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SCN18_30_10_14_R4_P_scaffold_1580

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1580_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1064)
DNA (1062bp) protein (354aa)
Transcriptional regulator, LysR family n=2 Tax=Afipia RepID=D6V0W2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS30469.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transcriptional regulator
SCN18_30_10_14_R4_P_scaffold_1580_2
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1198..2373)
DNA (1176bp) protein (392aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T245_9BRAD
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:KDM67013.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
cell division protein Fic
SCN18_30_10_14_R4_P_scaffold_1580_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2639..3652)
DNA (1014bp) protein (338aa)
appB; Cytochrome bd ubiquinol oxidase, subunit II (EC:1.10.3.-)
cytochrome D ubiquinol oxidase subunit II n=1 Tax=Legionella shakespearei RepID=UPI000378AA1F
Cytochrome bd-I ubiquinol oxidase subunit 2 {ECO:0000313|EMBL:CEE15181.1}; Cytochrome d ubiquinol oxidase subunit 2 {ECO:0000313|EMBL:CDZ79443.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
SCN18_30_10_14_R4_P_scaffold_1580_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3649..5049)
DNA (1401bp) protein (467aa)
Bacterial cytochrome ubiquinol oxidase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVZ6_9PROT
Bacterial cytochrome ubiquinol oxidase {ECO:0000313|EMBL:EHM02808.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative Cytochrome bd2, subunit I
SCN18_30_10_14_R4_P_scaffold_1580_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5064..5570)
DNA (507bp) protein (169aa)
Globin n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMJ1_METSB
Preprotein translocase subunit TatC {ECO:0000313|EMBL:ETR75620.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
globin
SCN18_30_10_14_R4_P_scaffold_1580_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5567..7063)
DNA (1497bp) protein (499aa)
2-nitropropane dioxygenase NPD n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AKW1_BURM1
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:EEE01899.1}; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD1.;"
SCN18_30_10_14_R4_P_scaffold_1580_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7044..7436)
DNA (393bp) protein (131aa)
UPI0003CF471D related cluster n=1 Tax=unknown RepID=UPI0003CF471D
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:ESY69909.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1580_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7448..7795)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNW3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62084.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R4_P_scaffold_1580_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7860..10196)
DNA (2337bp) protein (779aa)
Nitric oxide reductase subunit B n=1 Tax=Acetobacter pomorum DM001 RepID=F1YWY5_9PROT
Nitric oxide reductase subunit B {ECO:0000313|EMBL:GAJ30419.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
nitric oxide reductase
SCN18_30_10_14_R4_P_scaffold_1580_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10261..10737)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJL3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63584.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R4_P_scaffold_1580_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10899..11612
DNA (714bp) protein (238aa)
cAMP-binding protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IE70_9BURK
cAMP-binding protein {ECO:0000313|EMBL:EIF29022.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
Crp/FNR family transcriptional regulator
SCN18_30_10_14_R4_P_scaffold_1580_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11766..12953
DNA (1188bp) protein (396aa)
NnrS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQG1_NITHX
protein NnrS
NnrS {ECO:0000313|EMBL:ABE61536.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R4_P_scaffold_1580_trna_1
unknown

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comp(13433..13506)
DNA (74bp)
transferRNA Arg
SCN18_30_10_14_R4_P_scaffold_1580_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13860..16514)
DNA (2655bp) protein (885aa)
TIGR02302 family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6Y0_9PROT
TIGR02302 family protein {ECO:0000313|EMBL:EHL96745.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Putative membrane associated protein
SCN18_30_10_14_R4_P_scaffold_1580_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16511..17305)
DNA (795bp) protein (265aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=178901 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
diaminopimelate decarboxylase n=1 Tax=Acetobacter aceti RepID=UPI0002260B5D
diaminopimelate decarboxylase
Displaying 15 items

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