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SCN18_30_10_14_R4_P_scaffold_1711

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1711_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(381..1367)
DNA (987bp) protein (329aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIP7_9PROT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH12828.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
ABC transporter-like protein
SCN18_30_10_14_R4_P_scaffold_1711_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1370..2224)
DNA (855bp) protein (285aa)
Putative spermidine/putrescine ABC transporter permease component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDR0_AZOL4
Putative spermidine/putrescine ABC transporter; permease component
Putative spermidine/putrescine ABC transporter permease component {ECO:0000313|EMBL:CBS89685.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCN18_30_10_14_R4_P_scaffold_1711_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2221..3159)
DNA (939bp) protein (313aa)
Putative spermidine/putrescine ABC transporter permease component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQZ8_AZOBR
putative spermidine/putrescine ABC transporter; permease component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R4_P_scaffold_1711_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3156..4238)
DNA (1083bp) protein (361aa)
Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214}; EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F75E9C
monooxygenase RutA in pyrimidine catabolism pathway
SCN18_30_10_14_R4_P_scaffold_1711_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4255..5547)
DNA (1293bp) protein (431aa)
ABC transporter substrate binding protein (Spermidine/putrescine) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K4P5_AGRVS
ABC transporter substrate binding protein (spermidine/putrescine)
ABC transporter substrate binding protein (Spermidine/putrescine) {ECO:0000313|EMBL:ACM39843.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCN18_30_10_14_R4_P_scaffold_1711_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5922..8177)
DNA (2256bp) protein (752aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C0DB9
Cation transporter {ECO:0000313|EMBL:KFA93155.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
copper-exporting ATPase
SCN18_30_10_14_R4_P_scaffold_1711_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8389..9162
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EKE78869.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EKE78869.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7M1_9PROT
SCN18_30_10_14_R4_P_scaffold_1711_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9250..9651
DNA (402bp) protein (134aa)
rhodanese n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EBD8BB
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44614.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
rhodanese domain-containing protein
SCN18_30_10_14_R4_P_scaffold_1711_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9799..10371
DNA (573bp) protein (191aa)
Chloramphenicol phosphotransferase family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HMA5_GLUDA
chloramphenicol 3-O phosphotransferase
Chloramphenicol phosphotransferase family protein {ECO:0000313|EMBL:ACI50379.1}; Putative chloramphenicol 3-O phosphotransferase {ECO:0000313|EMBL:CAP56283.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_30_10_14_R4_P_scaffold_1711_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10401..11264)
DNA (864bp) protein (288aa)
LysR family transcriptional regulator n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3X1_9PROT
LysR family transcriptional regulator {ECO:0000313|EMBL:EGX99764.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
transcriptional regulator, LysR family
SCN18_30_10_14_R4_P_scaffold_1711_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11466..12344
DNA (879bp) protein (293aa)
6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP57_AZOBR
Oxidoreductase {ECO:0000313|EMBL:EWY35902.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
6-phosphogluconate dehydrogenase NAD-binding
SCN18_30_10_14_R4_P_scaffold_1711_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12518..13366
DNA (849bp) protein (283aa)
UPI0003CF2653 related cluster n=1 Tax=unknown RepID=UPI0003CF2653
Dehalogenase {ECO:0000313|EMBL:ESX90875.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
alpha/beta hydrolase fold
SCN18_30_10_14_R4_P_scaffold_1711_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13466..13996
DNA (531bp) protein (177aa)
UPI0003CF0439 related cluster n=1 Tax=unknown RepID=UPI0003CF0439
Glyoxalase {ECO:0000313|EMBL:ESX90876.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
glyoxalase family protein
SCN18_30_10_14_R4_P_scaffold_1711_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14045..14704)
DNA (660bp) protein (220aa)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EFH13080.1}; EC=2.8.3.- {ECO:0000313|EMBL:EFH13080.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
3-oxoacid CoA-transferase subunit B (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit B n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DB3C05
SCN18_30_10_14_R4_P_scaffold_1711_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14701..14811)
DNA (111bp) protein (37aa)
SCN18_30_10_14_R4_P_scaffold_1711_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14819..15502)
DNA (684bp) protein (228aa)
3-oxoadipate CoA-transferase subunit A {ECO:0000313|EMBL:ESR23355.1}; EC=2.8.3.6 {ECO:0000313|EMBL:ESR23355.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
pcaI; 3-oxoadipate CoA-transferase, subunit A PcaI (EC:2.8.3.6)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E169C2
SCN18_30_10_14_R4_P_scaffold_1711_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15753..16244
DNA (492bp) protein (164aa)
SCN18_30_10_14_R4_P_scaffold_1711_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16162..18279)
DNA (2118bp) protein (706aa)
CoA binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLW3_9PROT
CoA binding domain protein {ECO:0000313|EMBL:EFH11699.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative
SCN18_30_10_14_R4_P_scaffold_1711_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18414..19148)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FAEF55
sulfurase
Sulfurase {ECO:0000313|EMBL:AJP71596.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R4_P_scaffold_1711_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19213..20379)
DNA (1167bp) protein (389aa)
Transporter, major facilitator family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUJ3_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHM03377.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
major facilitator superfamily transporter
SCN18_30_10_14_R4_P_scaffold_1711_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20397..20936)
DNA (540bp) protein (180aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFH12643.1}; EC=2.3.1.183 {ECO:0000313|EMBL:EFH12643.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Acetyltransferase, GNAT family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ76_9PROT
N-acetyltransferase GCN5
SCN18_30_10_14_R4_P_scaffold_1711_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21057..21464
DNA (408bp) protein (136aa)
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUJ5_9PROT
LysR substrate binding domain protein {ECO:0000313|EMBL:EHM03379.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
LysR family transcriptional regulator
Displaying 22 items

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