ggKbase home page

SCN18_30_10_14_R4_P_scaffold_1815

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1815_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..295
DNA (294bp) protein (98aa)
glycosyl transferase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003656126
Glycosyl transferase {ECO:0000313|EMBL:GAN76301.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
glycosyl transferase family protein
SCN18_30_10_14_R4_P_scaffold_1815_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(321..932)
DNA (612bp) protein (204aa)
TetR family regulatory protein 2 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T0S7_ALCXX
TetR family regulatory protein 2 {ECO:0000313|EMBL:EGP46092.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
TetR family transcriptional regulator
SCN18_30_10_14_R4_P_scaffold_1815_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(936..1712)
DNA (777bp) protein (259aa)
Putative 3-hydroxypropionyl-CoA dehydratase n=1 Tax=Variovorax paradoxus B4 RepID=T1XM16_VARPD
putative 3-hydroxypropionyl-CoA dehydratase
Putative 3-hydroxypropionyl-CoA dehydratase {ECO:0000313|EMBL:AGU53633.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_30_10_14_R4_P_scaffold_1815_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1839..2900
DNA (1062bp) protein (354aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Sciscionella marina RepID=UPI00035EF3CA
Uncharacterized protein {ECO:0000313|EMBL:ETW99654.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
SCN18_30_10_14_R4_P_scaffold_1815_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2927..4186
DNA (1260bp) protein (420aa)
ABC transporter permease n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036A1AE1
substrate-binding protein
Probable substrate-binding protein {ECO:0000313|EMBL:BAL74140.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_30_10_14_R4_P_scaffold_1815_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4530..5651
DNA (1122bp) protein (374aa)
Phage integrase family site specific recombinase n=1 Tax=Citreicella sp. 357 RepID=I1ASY5_9RHOB
Phage integrase family site specific recombinase {ECO:0000313|EMBL:EIE49606.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;"
phage integrase family site specific recombinase
SCN18_30_10_14_R4_P_scaffold_1815_7
unknown

Not on your lists

comp(5628..6194)
DNA (567bp) protein (189aa)

This feature has no annotations

SCN18_30_10_14_R4_P_scaffold_1815_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6277..6468
DNA (192bp) protein (64aa)
Phage transcriptional regulator AlpA n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y720_9PROT
Phage transcriptional regulator AlpA {ECO:0000313|EMBL:EME68856.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1815_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6471..6704
DNA (234bp) protein (78aa)
SCN18_30_10_14_R4_P_scaffold_1815_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6701..7900
DNA (1200bp) protein (400aa)
SCN18_30_10_14_R4_P_scaffold_1815_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7900..9177
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2S3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL99353.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ATPase-like protein
SCN18_30_10_14_R4_P_scaffold_1815_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9523..10335
DNA (813bp) protein (271aa)
SCN18_30_10_14_R4_P_scaffold_1815_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10332..10784
DNA (453bp) protein (151aa)
SCN18_30_10_14_R4_P_scaffold_1815_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10797..11258
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE97778.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
SCN18_30_10_14_R4_P_scaffold_1815_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11255..11809
DNA (555bp) protein (185aa)
SCN18_30_10_14_R4_P_scaffold_1815_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11806..12300
DNA (495bp) protein (165aa)
SCN18_30_10_14_R4_P_scaffold_1815_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12290..12610
DNA (321bp) protein (107aa)
SCN18_30_10_14_R4_P_scaffold_1815_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12620..13774
DNA (1155bp) protein (385aa)
Bacteriophage Mu P protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RTF2_9PROT
Bacteriophage Mu P protein {ECO:0000313|EMBL:EFH09383.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
bacteriophage tail protein GpP Mu-like
SCN18_30_10_14_R4_P_scaffold_1815_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13811..15163
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Commensalibacter intestini A911 RepID=G6F005_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHD14087.1}; TaxID=1088868 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" source="Commensalibacter intestini A911.;"
phage related tail protein
Displaying 19 items

View Taxonomy