ggKbase home page

SCN18_30_10_14_R4_P_scaffold_1863

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1863_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1346
DNA (1344bp) protein (448aa)
Glutamate synthase family protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KU66_MESAW
glutamate synthase family protein
Glutamate synthase family protein {ECO:0000313|EMBL:AGB47539.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_30_10_14_R4_P_scaffold_1863_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1616..2137)
DNA (522bp) protein (174aa)
Lipoprotein n=2 Tax=Enterobacter RepID=K4YHQ7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAN77634.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
lipoprotein
SCN18_30_10_14_R4_P_scaffold_1863_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2756..3382
DNA (627bp) protein (209aa)
Putative lysine exporter protein (LYSE/YGGA) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S4X6_9BRAD
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EPJ53483.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1863_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3501..4547)
DNA (1047bp) protein (349aa)
Gluconate 2-dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IE45_9BRAD
2-ketogluconate reductase {ECO:0000313|EMBL:KJC57750.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
2-ketogluconate reductase
SCN18_30_10_14_R4_P_scaffold_1863_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4588..5763)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000382D327
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R4_P_scaffold_1863_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5839..7410)
DNA (1572bp) protein (524aa)
SCN18_30_10_14_R4_P_scaffold_1863_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7567..8958)
DNA (1392bp) protein (464aa)
Amidase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y6G3_RAMTT
amidase
Amidase-like protein {ECO:0000313|EMBL:AEG94037.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_30_10_14_R4_P_scaffold_1863_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9199..10332)
DNA (1134bp) protein (378aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
2-dehydropantoate 2-reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQ09_9BRAD
putative 2-dehydropantoate 2-reductase
SCN18_30_10_14_R4_P_scaffold_1863_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10457..10786)
DNA (330bp) protein (110aa)
SCN18_30_10_14_R4_P_scaffold_1863_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10847..11737)
DNA (891bp) protein (297aa)
Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RS94_9PROT
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KGM32928.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Phosphonate ABC transporter permease protein phnE1
SCN18_30_10_14_R4_P_scaffold_1863_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11734..12669)
DNA (936bp) protein (312aa)
Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A605_9PROT
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EHL97317.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Phosphonate ABC transporter permease protein phnE2
SCN18_30_10_14_R4_P_scaffold_1863_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12707..13651)
DNA (945bp) protein (315aa)
Phosphonate ABC transporter, periplasmic phosphonate binding protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A607_9PROT
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM32929.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Phosphonate ABC transporter phosphate-binding protein periplasmic component
SCN18_30_10_14_R4_P_scaffold_1863_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13721..14539)
DNA (819bp) protein (273aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elongatum DSM 19469.;"
Phosphonate/organophosphate ester transporter subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MD51_9RHIZ
Phosphonate ABC transporter ATP-binding protein
SCN18_30_10_14_R4_P_scaffold_1863_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14775..15020)
DNA (246bp) protein (82aa)
Acyl carrier protein n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z461_PSEST
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
acyl carrier protein
SCN18_30_10_14_R4_P_scaffold_1863_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15025..16929)
DNA (1905bp) protein (635aa)
FkbH-like protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YGZ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAN75873.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
FkbH-like protein
SCN18_30_10_14_R4_P_scaffold_1863_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16982..18100)
DNA (1119bp) protein (373aa)
SCN18_30_10_14_R4_P_scaffold_1863_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18471..19133
DNA (663bp) protein (221aa)
Probable septum site-determining protein MinC n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSN1_9RHIZ
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
minC; septum formation inhibitor
SCN18_30_10_14_R4_P_scaffold_1863_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19192..20007
DNA (816bp) protein (272aa)
Site-determining protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSN2_9RHIZ
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
septum site-determining protein MinD
SCN18_30_10_14_R4_P_scaffold_1863_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20004..20294
DNA (291bp) protein (97aa)
cell division topological specificity factor MinE n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=UPI000173D7B0
minE; cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCN18_30_10_14_R4_P_scaffold_1863_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20405..20977)
DNA (573bp) protein (191aa)
acetyltransferase (EC:2.3.1.-)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000372D8D6
Acetyltransferase {ECO:0000313|EMBL:GAN77106.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R4_P_scaffold_1863_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20974..22077)
DNA (1104bp) protein (368aa)
16S rRNA m(5)C 967 methyltransferase (EC:2.1.1.-)
16S rRNA m(5)C 967 methyltransferase {ECO:0000313|EMBL:AHJ62977.1}; EC=2.1.1.- {ECO:0000313|EMBL:AHJ62977.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
16S rRNA m(5)C 967 methyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BT06_GRABC
Displaying 21 items

View Taxonomy