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SCN18_30_10_14_R4_P_scaffold_1874

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1874_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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1..411
DNA (411bp) protein (137aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase id=3618743 bin=GWF2_Methylomirabilis_70_14 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_30_10_14_R4_P_scaffold_1874_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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843..1229
DNA (387bp) protein (129aa)
PRC-barrel domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRC2_9PROT
PRC-barrel domain protein {ECO:0000313|EMBL:EFH10146.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCN18_30_10_14_R4_P_scaffold_1874_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1410..2465)
DNA (1056bp) protein (352aa)
D-3-phosphoglycerate dehydrogenase (PGDH) (EC:1.1.1.95)
Putative D-3-phosphoglycerate dehydrogenase (PGDH) {ECO:0000313|EMBL:CAL78634.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CAL78634.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Putative D-3-phosphoglycerate dehydrogenase (PGDH) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YXK8_BRASO
SCN18_30_10_14_R4_P_scaffold_1874_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2591..3010
DNA (420bp) protein (140aa)
polyketide cyclase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003765C25
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_30_10_14_R4_P_scaffold_1874_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3036..3161)
DNA (126bp) protein (42aa)
SCN18_30_10_14_R4_P_scaffold_1874_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3164..4234)
DNA (1071bp) protein (357aa)
Bll8153 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89BJ5_BRADU
hypothetical protein
Bll8153 protein {ECO:0000313|EMBL:BAC53418.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCN18_30_10_14_R4_P_scaffold_1874_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4490..7261
DNA (2772bp) protein (924aa)
diguanylate cyclase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036CDF19
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACA16328.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_30_10_14_R4_P_scaffold_1874_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7374..7910)
DNA (537bp) protein (179aa)
SCN18_30_10_14_R4_P_scaffold_1874_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8157..9164
DNA (1008bp) protein (336aa)
pld2; pyridoxal4-dehydrogenase Pld (EC:1.1.1.107)
Pyridoxal4-dehydrogenase Pld {ECO:0000313|EMBL:AGI71905.1}; EC=1.1.1.107 {ECO:0000313|EMBL:AGI71905.1};; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
aldo/keto reductase n=1 Tax=Burkholderia kururiensis RepID=UPI000346EDAD
SCN18_30_10_14_R4_P_scaffold_1874_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9508..11601
DNA (2094bp) protein (698aa)
Ribonuclease R (EC:3.1.13.1)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Ribonuclease R n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU01_GRABC
SCN18_30_10_14_R4_P_scaffold_1874_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11598..13154
DNA (1557bp) protein (519aa)
Carboxy-terminal processing protease n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9GZP9_GLUDA
carboxy-terminal processing protease
Carboxy-terminal processing protease {ECO:0000313|EMBL:CAP53986.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_30_10_14_R4_P_scaffold_1874_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13447..14568)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2V9_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD05201.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_30_10_14_R4_P_scaffold_1874_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15534..16865
DNA (1332bp) protein (444aa)
type 11 methyltransferase
hypothetical protein AATC3_01647 id=2694182 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
SCN18_30_10_14_R4_P_scaffold_1874_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16837..17718)
DNA (882bp) protein (294aa)
Taurine dioxygenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZI8_9BRAD
dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R4_P_scaffold_1874_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17853..19088)
DNA (1236bp) protein (412aa)
aminotransferase (EC:2.6.1.-)
Glutamate-cysteine ligase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HH18_9BRAD
2-aminoadipate transaminase {ECO:0000313|EMBL:CEJ14831.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_30_10_14_R4_P_scaffold_1874_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19179..19736)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZC04_AZOL4
exported hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS89030.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCN18_30_10_14_R4_P_scaffold_1874_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19816..21108)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2G0_9PROT
Putative membrane-bound protease
Putative membrane-bound protease {ECO:0000313|EMBL:AHJ63142.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R4_P_scaffold_1874_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21105..22286)
DNA (1182bp) protein (394aa)
Transporter, major facilitator family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2G1_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHL99659.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative permease of the major facilitator superfamily MFS-1
SCN18_30_10_14_R4_P_scaffold_1874_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22835..23779)
DNA (945bp) protein (315aa)
Multimodular transpeptidase-transglycosylase PBP 1A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV85_GRABC
Multimodular transpeptidase-transglycosylase PBP 1A
Multimodular transpeptidase-transglycosylase PBP 1A {ECO:0000313|EMBL:ABI61267.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Displaying 19 items

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