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SCN18_30_10_14_R4_P_scaffold_1895

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_P_scaffold_1895_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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303..3839
DNA (3537bp) protein (1179aa)
Outer membrane autotransporter barrel domain n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07P01_RHOP5
outer membrane autotransporter
Outer membrane autotransporter barrel domain {ECO:0000313|EMBL:ABJ06333.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_30_10_14_R4_P_scaffold_1895_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3858..4556
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JWX4_BURP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC75451.1}; Flags: Precursor;; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
SCN18_30_10_14_R4_P_scaffold_1895_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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4687..4974
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHM6_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79067.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_30_10_14_R4_P_scaffold_1895_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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5067..5279
DNA (213bp) protein (71aa)
SCN18_30_10_14_R4_P_scaffold_1895_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5401..7794)
DNA (2394bp) protein (798aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XY21_9PROT
two-component hybrid sensor and regulator
SCN18_30_10_14_R4_P_scaffold_1895_trna_1
unknown

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comp(7933..8011)
DNA (79bp)
transferRNA Gly
SCN18_30_10_14_R4_P_scaffold_1895_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8085..9053)
DNA (969bp) protein (323aa)
Peptide chain release factor 2 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HF65_GLUDA
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
prfB; peptide chain release factor 2
SCN18_30_10_14_R4_P_scaffold_1895_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9372..12005)
DNA (2634bp) protein (878aa)
Multimodular transpeptidase-transglycosylase PBP 1A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVH3_GRABC
Multimodular transpeptidase-transglycosylase PBP 1A {ECO:0000313|EMBL:ABI61179.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Multimodular transpeptidase-transglycosylase PBP 1A
SCN18_30_10_14_R4_P_scaffold_1895_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12090..12992)
DNA (903bp) protein (301aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVH2_GRABC
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:GAN78356.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R4_P_scaffold_1895_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13666..14385
DNA (720bp) protein (240aa)
Ribonuclease E (EC:3.1.26.12)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003093DAF
Ribonuclease E {ECO:0000313|EMBL:CEJ12289.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying 10 items

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