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SCN18_25_1_16_R5_B_scaffold_452

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_452_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1070
DNA (1068bp) protein (356aa)
Putative ABC transporter, ATP-binding protein, ATPase {ECO:0000313|EMBL:KFC66500.1}; EC=3.6.3.31 {ECO:0000313|EMBL:KFC66500.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter, permease/ATP-binding protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTS3_9RHIZ
lipid A ABC exporter family, fused ATPase and inner membrane subunits
SCN18_25_1_16_R5_B_scaffold_452_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1397..2089
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003164EB6
Diguanylate cyclase {ECO:0000313|EMBL:EXL08713.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
diguanylate cyclase
SCN18_25_1_16_R5_B_scaffold_452_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2259..4619)
DNA (2361bp) protein (787aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA/RNA helicase, superfamily I n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVJ8_9RHIZ
UvrD/REP helicase
SCN18_25_1_16_R5_B_scaffold_452_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4748..5674)
DNA (927bp) protein (309aa)
Esterase family protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HW15_ACHXA
esterase family protein 1
Esterase family protein 1 {ECO:0000313|EMBL:ADP16328.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCN18_25_1_16_R5_B_scaffold_452_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5828..7471
DNA (1644bp) protein (548aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z0L3_9PROT
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:KFC73790.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acyl-CoA dehydrogenase
SCN18_25_1_16_R5_B_scaffold_452_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7582..8022)
DNA (441bp) protein (147aa)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:KFC73789.1}; EC=1.8.4.11 {ECO:0000313|EMBL:KFC73789.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Methionine-R-sulfoxide reductase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ENR1_METSB
SCN18_25_1_16_R5_B_scaffold_452_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8221..9474
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036693FD
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase {ECO:0000313|EMBL:KFC73788.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_452_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9471..10136
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003652526
Methyltransferase type 12 {ECO:0000313|EMBL:KFC73787.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
type 12 methyltransferase
SCN18_25_1_16_R5_B_scaffold_452_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10179..10979
DNA (801bp) protein (267aa)
Ion transporter n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDG3_9RHIZ
Ion transport 2 domain protein {ECO:0000313|EMBL:KFC73786.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ion transport 2 domain-containing protein
SCN18_25_1_16_R5_B_scaffold_452_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11043..11708)
DNA (666bp) protein (222aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JWZ3_BURP8
putative MarC family transmembrane protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCN18_25_1_16_R5_B_scaffold_452_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11823..12383)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UAH7_METS4
Uncharacterized protein {ECO:0000313|EMBL:KFC73784.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_452_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12566..14005
DNA (1440bp) protein (480aa)
D-lactate dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000309BDF2
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:KFC73783.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FAD linked oxidase domain-containing protein
SCN18_25_1_16_R5_B_scaffold_452_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14109..17795
DNA (3687bp) protein (1229aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313687D
Uncharacterized protein {ECO:0000313|EMBL:KFC73782.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_452_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17885..18541)
DNA (657bp) protein (219aa)
Lysine efflux permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX52_9RHIZ
Lysine efflux permease {ECO:0000313|EMBL:EYR78550.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lysine exporter protein LysE/YggA
SCN18_25_1_16_R5_B_scaffold_452_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18587..19495
DNA (909bp) protein (303aa)
Transcriptional regulator, ArgP family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9XFS4_RHILT
Transcriptional regulator ArgP {ECO:0000313|EMBL:GAK71714.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
chromosome replication initiation inhibitor protein
SCN18_25_1_16_R5_B_scaffold_452_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19479..19721)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E32FEE
Uncharacterized protein {ECO:0000313|EMBL:KFC73781.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_452_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19718..19918)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5F74A
Uncharacterized protein {ECO:0000313|EMBL:KFC73780.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_452_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19922..21316)
DNA (1395bp) protein (465aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Fumarate hydratase class II n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IF16_METNO
class II fumarate hydratase
SCN18_25_1_16_R5_B_scaffold_452_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21324..21923)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000378E707
Uncharacterized protein {ECO:0000313|EMBL:KFC73778.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_452_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22492..22764)
DNA (273bp) protein (91aa)
SCN18_25_1_16_R5_B_scaffold_452_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22998..23792
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Thymidylate synthase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDL9_METPB
thymidylate synthase
SCN18_25_1_16_R5_B_scaffold_452_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23789..24271
DNA (483bp) protein (161aa)
GCN5-related N-acetyltransferase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7E2_STAND
General L-amino acid transport system permease {ECO:0000313|EMBL:KFC73775.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
N-acetyltransferase GCN5
SCN18_25_1_16_R5_B_scaffold_452_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24276..24803
DNA (528bp) protein (176aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVP7_9RHIZ
SCN18_25_1_16_R5_B_scaffold_452_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24973..26142
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E0F53A
HflK protein {ECO:0000313|EMBL:KFC67039.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HflK protein
SCN18_25_1_16_R5_B_scaffold_452_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26139..26828
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031A78A7
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HflC protein
Displaying 25 items

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