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SCN18_25_1_16_R5_B_scaffold_670

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_670_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..445)
DNA (444bp) protein (148aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8II20_AZOC5
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase {ECO:0000313|EMBL:KFC71638.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_670_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(442..1167)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8II22_AZOC5
Putative LmbE-like protein {ECO:0000313|EMBL:KFC71639.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_670_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1195..2277)
DNA (1083bp) protein (361aa)
Methylitaconate delta2-delta3-isomerase {ECO:0000313|EMBL:KFC71640.1}; EC=5.3.3.6 {ECO:0000313|EMBL:KFC71640.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FldA protein n=1 Tax=Burkholderia bryophila RepID=UPI00036F9D51
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_670_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2410..3303)
DNA (894bp) protein (298aa)
Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8II36_AZOC5
Transcriptional regulator {ECO:0000313|EMBL:KFC71642.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
lysR; transcriptional regulator
SCN18_25_1_16_R5_B_scaffold_670_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3473..4396
DNA (924bp) protein (308aa)
Putative dehydrogenase {ECO:0000313|EMBL:KFC70748.1}; EC=1.1.1.- {ECO:0000313|EMBL:KFC70748.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037969B1
putative dehydrogenase, with NAD binding domain
SCN18_25_1_16_R5_B_scaffold_670_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4583..5707
DNA (1125bp) protein (375aa)
Putative exonuclease n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EZI1_9RHIZ
Exonuclease {ECO:0000313|EMBL:ESY94310.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
metallophosphoesterase
SCN18_25_1_16_R5_B_scaffold_670_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5704..8334
DNA (2631bp) protein (877aa)
UPI0003CFFCE9 related cluster n=1 Tax=unknown RepID=UPI0003CFFCE9
DNA-binding protein {ECO:0000313|EMBL:KKC38050.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
SMC domain-containing protein
SCN18_25_1_16_R5_B_scaffold_670_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8781..11045
DNA (2265bp) protein (755aa)
Putative outer membrane receptor for iron transport n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NBR3_RHOPA
outer membrane receptor for iron transport
Putative outer membrane receptor for iron transport {ECO:0000313|EMBL:CAE26209.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCN18_25_1_16_R5_B_scaffold_670_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11103..12068
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E69049
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KAJ35636.1}; Flags: Fragment;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
conserved exported protein of unknown function
SCN18_25_1_16_R5_B_scaffold_670_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12073..12882
DNA (810bp) protein (270aa)
ABC transporter, membrane spanning protein (Anion) n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGK9_AGRT5
anion ABC transporter permease
Nitrate transport permease protein nrtB {ECO:0000313|EMBL:KJX85870.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCN18_25_1_16_R5_B_scaffold_670_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12879..13619
DNA (741bp) protein (247aa)
Taurine ATP-binding component of a transport system {ECO:0000313|EMBL:KJX85871.1}; EC=3.6.3.36 {ECO:0000313|EMBL:KJX85871.1};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EF6151
anion ABC transporter ATPase
SCN18_25_1_16_R5_B_scaffold_670_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13616..14827
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGL1_AGRT5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJX85872.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCN18_25_1_16_R5_B_scaffold_670_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15054..16802
DNA (1749bp) protein (583aa)
Integrase family protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QEY9_RHOPT
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACF02493.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
Displaying 13 items

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