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SCN18_14_9_16_R1_B_scaffold_571

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_571_1
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..873
DNA (873bp) protein (291aa)
kdpA; high-affinity potassium transport system P-type ATPase, , A chain (EC:3.6.3.9)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Potassium-transporting ATPase A chain n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJC7_9BACT
SCN18_14_9_16_R1_B_scaffold_571_2
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

903..3107
DNA (2205bp) protein (735aa)
potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CR73_9BURK
Tax=RBG_13_Acidobacteria_68_16_curated
SCN18_14_9_16_R1_B_scaffold_571_3
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3116..3760
DNA (645bp) protein (215aa)
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Potassium-transporting ATPase C chain n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVN5_SORCE
SCN18_14_9_16_R1_B_scaffold_571_4
unknown

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4226..4501
DNA (276bp) protein (92aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_571_5
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4514..5017)
DNA (504bp) protein (168aa)
Histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJR97254.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
multi-sensor signal transduction histidine kinase
SCN18_14_9_16_R1_B_scaffold_571_6
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

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comp(5155..5982)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0ZA18_9CHLO
Uncharacterized protein {ECO:0000313|EMBL:EIE27487.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_571_7
unknown

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comp(6100..6903)
DNA (804bp) protein (268aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_571_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7240..8148
DNA (909bp) protein (303aa)
Putative LysR family transcriptional regulator n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIW9_RHIFH
LysR family transcriptional regulator {ECO:0000313|EMBL:EZQ16903.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
LysR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_571_9
unknown

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8402..8602
DNA (201bp) protein (67aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_571_10
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8606..9181
DNA (576bp) protein (192aa)
RNA polymerase sigma70 n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I0Y7_9GAMM
RNA polymerase sigma70 {ECO:0000313|EMBL:ERS15225.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
SCN18_14_9_16_R1_B_scaffold_571_11
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9178..9750
DNA (573bp) protein (191aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLW5_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN98273.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_571_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9764..10627)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQN4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90471.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_571_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10624..11562)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQN5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90472.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_571_14
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12235..12651
DNA (417bp) protein (139aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IW57_NOSP7
cupin
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ACC84518.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
SCN18_14_9_16_R1_B_scaffold_571_15

Not on your lists

12657..13082
DNA (426bp) protein (142aa)
Marine sediment metagenome DNA, contig: S01H1_L05952 {ECO:0000313|EMBL:GAF69188.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_14_9_16_R1_B_scaffold_571_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13106..14062)
DNA (957bp) protein (319aa)
glucokinase n=1 Tax=Amycolatopsis alba RepID=UPI00037E55BB
glk; glucokinase
Tax=RBG_16_Acidobacteria_70_10_curated
SCN18_14_9_16_R1_B_scaffold_571_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14150..14653
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW37_SORCE
Marine sediment metagenome DNA, contig: S01H1_L05952 {ECO:0000313|EMBL:GAF69191.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_571_18
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14637..15749)
DNA (1113bp) protein (371aa)
Glycosyl transferase group 1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNC0_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EEF58673.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
group 1 glycosyl transferase
SCN18_14_9_16_R1_B_scaffold_571_19
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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16006..16500
DNA (495bp) protein (165aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE95_CHLTF
Signal transduction response regulator {ECO:0000313|EMBL:AKF10195.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein
SCN18_14_9_16_R1_B_scaffold_571_20
unknown

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16657..16971
DNA (315bp) protein (105aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_571_21
unknown

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16934..17533
DNA (600bp) protein (200aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_571_trna_1
unknown

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comp(17066..17140)
DNA (75bp)
transferRNA Pro
SCN18_14_9_16_R1_B_scaffold_571_22
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(17478..19877)
DNA (2400bp) protein (800aa)
Heavy metal translocating P-type ATPase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHT2_ANADF
Copper ABC transporter ATPase {ECO:0000313|EMBL:KIE44261.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
heavy metal translocating P-type ATPase
SCN18_14_9_16_R1_B_scaffold_571_23
unknown

Not on your lists

comp(20092..20787)
DNA (696bp) protein (232aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_571_24
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21023..21391)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E283DD
Ferredoxin {ECO:0000313|EMBL:KIF80002.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_571_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21635..24250)
DNA (2616bp) protein (872aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXL7_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97112.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_571_26
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24274..25446)
DNA (1173bp) protein (391aa)
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3A3_9DELT
Peptidase {ECO:0000313|EMBL:KFA89639.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
peptidase m20
SCN18_14_9_16_R1_B_scaffold_571_27
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25699..26595
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILA7_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC82439.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
SCN18_14_9_16_R1_B_scaffold_571_28
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

Not on your lists

26725..27789
DNA (1065bp) protein (355aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMB5_ANADE
SCN18_14_9_16_R1_B_scaffold_571_29
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27807..28670
DNA (864bp) protein (288aa)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000255|HAMAP-Rule:MF_00082}; Short=AGK {ECO:0000255|HAMAP-Rule:MF_00082};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Acetylglutamate kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=ARGB_SORC5
argB2; hypothetical protein
Displaying items 1-30 of 35 in total

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