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SCN18_14_9_16_R1_B_scaffold_749

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_749_1
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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236..1669
DNA (1434bp) protein (478aa)
GTP-binding domain protein n=2 Tax=Geobacter metallireducens RepID=Q39U63_GEOMG
GTP-binding domain-containing protein
GTP-binding domain protein {ECO:0000313|EMBL:ABB32211.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
SCN18_14_9_16_R1_B_scaffold_749_2
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

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1771..3354
DNA (1584bp) protein (528aa)
Probable gliding protein mglA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1B7_9DELT
Gliding motility protein MglA {ECO:0000313|EMBL:KIG14736.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_749_3
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3399..3962
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QAT0_PSECO
Uncharacterized protein {ECO:0000313|EMBL:EYF06585.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
membrane protein
SCN18_14_9_16_R1_B_scaffold_749_4
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3947..4735
DNA (789bp) protein (263aa)
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EYF06580.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCN18_14_9_16_R1_B_scaffold_749_5
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4732..6093
DNA (1362bp) protein (454aa)
Flp pilus assembly protein, secretin CpaC n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0K1C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EYF06579.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
outer membrane protein
SCN18_14_9_16_R1_B_scaffold_749_6
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6090..6956
DNA (867bp) protein (289aa)
Bacterial type II secretion system domain protein F n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RV00_9BURK
Flp pilus assembly protein TadB {ECO:0000313|EMBL:EYF06577.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
type II secretion system F domain protein
SCN18_14_9_16_R1_B_scaffold_749_7
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

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6953..7855
DNA (903bp) protein (301aa)
Type II/IV secretion system protein TadC, associated with Flp pilus assembly {ECO:0000313|EMBL:EYF06576.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
type II secretion system protein; K12511 tight adherence protein C id=14630351 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
type II secretion system F domain-containing protein
SCN18_14_9_16_R1_B_scaffold_749_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7868..8722
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06575.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCN18_14_9_16_R1_B_scaffold_749_9
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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8728..9321
DNA (594bp) protein (198aa)
Zinc finger/thioredoxin putative n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IN21_ANADE
Uncharacterized protein {ECO:0000313|EMBL:EYF06572.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
zinc finger/thioredoxin
SCN18_14_9_16_R1_B_scaffold_749_10
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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9339..11063
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Guillardia theta CCMP2712 RepID=L1IEH2_GUITH
Uncharacterized protein {ECO:0000313|EMBL:EKX34274.1, ECO:0000313|EnsemblProtists:EKX34274}; TaxID=905079 species="Eukaryota; Cryptophyta; Pyrenomonadales; Geminigeraceae; Guillardia.;" source="Guillardia theta CCMP2712.;"
DNA polymerase III, gamma/tau subunits
SCN18_14_9_16_R1_B_scaffold_749_11
unknown

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11060..11230
DNA (171bp) protein (57aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_749_12
unknown

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11384..12259
DNA (876bp) protein (292aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_749_13
unknown

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12622..13608
DNA (987bp) protein (329aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_749_14
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13677..14204
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQR3_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF85318.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_749_15
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14201..15001
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XS96_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33448.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_749_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15029..16228
DNA (1200bp) protein (400aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2I9_PHYPA
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_749_17
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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16225..17427
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI000378FC32
SCN18_14_9_16_R1_B_scaffold_749_18
unknown

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17424..18725
DNA (1302bp) protein (434aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_749_19
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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18700..20037
DNA (1338bp) protein (446aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
chromosome condensation regulator RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ACL23605.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCN18_14_9_16_R1_B_scaffold_749_20
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

Not on your lists

20034..21827
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_749_21
unknown

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21824..22813
DNA (990bp) protein (330aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_749_22
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

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23008..24756
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTQ7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33953.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_749_23
unknown

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24753..25679
DNA (927bp) protein (309aa)

This feature has no annotations

Displaying 23 items

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