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SCN18_14_9_16_R1_B_scaffold_3011

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3011_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3..449)
DNA (447bp) protein (149aa)
Serine/threonine protein kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ80_HALO1
Uncharacterized protein {ECO:0000313|EMBL:EYF08349.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
serine/threonine protein kinase
SCN18_14_9_16_R1_B_scaffold_3011_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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802..1542
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFQ1_HALO1
Uncharacterized protein {ECO:0000313|EMBL:AKF10544.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3011_3
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1806..3212
DNA (1407bp) protein (469aa)
Acetoacetate metabolism regulatory protein AtoC n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMN3_SORCE
acetoacetate metabolism regulatory protein AtoC
Acetoacetate metabolism regulatory protein AtoC {ECO:0000313|EMBL:AGP32980.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_3011_4
unknown

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comp(3254..3829)
DNA (576bp) protein (192aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_3011_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4157..4726)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y498_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39639.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_3011_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5141..5500
DNA (360bp) protein (120aa)
Gas vesicle structural protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9YZ67_STRSW
gas vesicle synthesis protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_14_9_16_R1_B_scaffold_3011_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5530..5904
DNA (375bp) protein (125aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_14_9_16_R1_B_scaffold_3011_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5919..8090
DNA (2172bp) protein (724aa)
Sensory box histidine kinase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C9Y0_MYXFH
Two-component system sensory histidine kinase {ECO:0000313|EMBL:AKF10196.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
sensory box histidine kinase
SCN18_14_9_16_R1_B_scaffold_3011_9
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

8087..8515
DNA (429bp) protein (143aa)
Response regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PFB4_9DELT
Response regulator {ECO:0000313|EMBL:EPX61741.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
divK; response regulator
SCN18_14_9_16_R1_B_scaffold_3011_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8515..9669
DNA (1155bp) protein (385aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
Gas vesicle synthesis GvpLGvpF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_14_9_16_R1_B_scaffold_3011_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9692..10021
DNA (330bp) protein (110aa)
Gas vesicle G n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5D6_GEOUR
gas vesicle protein G
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_14_9_16_R1_B_scaffold_3011_12
unknown

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comp(10094..11263)
DNA (1170bp) protein (390aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_3011_13
unknown

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11587..12696
DNA (1110bp) protein (370aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_3011_14
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12818..13369
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQM1_SORCE
ECF family RNA polymerase sigma factor
Uncharacterized protein {ECO:0000313|EMBL:AGP35472.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_3011_15
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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13366..14109
DNA (744bp) protein (248aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2N9_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN95670.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_3011_16
unknown

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14106..14438
DNA (333bp) protein (111aa)

This feature has no annotations

Displaying 16 items

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