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SCN18_14_9_16_R1_B_scaffold_3189

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3189_1
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

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comp(1..909)
DNA (909bp) protein (303aa)
Probable gliding protein mglA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1B7_9DELT
Probable gliding protein mglA {ECO:0000313|EMBL:EDM80412.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
MglA protein
SCN18_14_9_16_R1_B_scaffold_3189_2
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1093..1599)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1H0_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE04283.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_14_9_16_R1_B_scaffold_3189_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1763..3412
DNA (1650bp) protein (550aa)
Deoxyribodipyrimidine photolyase homolog n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9W1_ACIC5
deoxyribodipyrimidine photolyase
Deoxyribodipyrimidine photolyase homolog {ECO:0000313|EMBL:ACO34462.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCN18_14_9_16_R1_B_scaffold_3189_4
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3507..5171
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PQD4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX65246.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
regulator of chromosome condensation
SCN18_14_9_16_R1_B_scaffold_3189_5
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5196..6659
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UMR5_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC48847.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCN18_14_9_16_R1_B_scaffold_3189_6
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

6911..7276
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZT3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE11971.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3189_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7276..7824
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Wohlfahrtiimonas chitiniclastica SH04 RepID=L8Y1R1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ELV08969.1}; TaxID=1261130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Wohlfahrtiimonas.;" source="Wohlfahrtiimonas chitiniclastica SH04.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3189_8
unknown

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8249..8548
DNA (300bp) protein (100aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_3189_9
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8545..9204
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZG0_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL79286.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCN18_14_9_16_R1_B_scaffold_3189_10
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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9201..10019
DNA (819bp) protein (273aa)
SCN18_14_9_16_R1_B_scaffold_3189_11
unknown

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10130..10762
DNA (633bp) protein (211aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_3189_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11018..12547
DNA (1530bp) protein (510aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHW4_CORCM
AMP-dependent synthetase {ECO:0000313|EMBL:KFA91020.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
lcfB2; long-chain-fatty-acid--CoA ligase
SCN18_14_9_16_R1_B_scaffold_3189_13
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12544..13032
DNA (489bp) protein (163aa)
2-dehydropantoate 2-reductase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHW3_CORCM
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:GAN77098.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
panE; 2-dehydropantoate 2-reductase
SCN18_14_9_16_R1_B_scaffold_3189_14
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12977..13531
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003656C04
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:KFA91021.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
panE; 2-dehydropantoate 2-reductase
SCN18_14_9_16_R1_B_scaffold_3189_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13553..13966
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D199_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF89488.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
SCN18_14_9_16_R1_B_scaffold_3189_16
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

13993..15414
DNA (1422bp) protein (474aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
RNA-splicing ligase RtcB n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1A0_MYXXD
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3189_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15544..16068
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y897_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41687.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying 17 items

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