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SCN18_14_9_16_R1_B_scaffold_3382

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3382_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..627
DNA (627bp) protein (209aa)
Sigma-54 dependent transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQP6_SORC5
Sigma54 specific transcriptional regulator with PAS sensor, Fis family {ECO:0000313|EMBL:EYF00784.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
sigma-54 dependent transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_3382_2
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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624..2282
DNA (1659bp) protein (553aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH95294.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
SCN18_14_9_16_R1_B_scaffold_3382_3
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2335..3990
DNA (1656bp) protein (552aa)
Putative integrin-like protein {ECO:0000313|EMBL:AKF10232.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_14_9_16_R1_B_scaffold_3382_4
unknown

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4033..4776
DNA (744bp) protein (248aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_3382_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4828..5301)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4V7U5_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
SCN18_14_9_16_R1_B_scaffold_3382_6
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(5301..5729)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJ41_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY14888.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCN18_14_9_16_R1_B_scaffold_3382_7
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5733..6575)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I1D3_MYCRH
Putative uncharacterized protein {ECO:0000313|EMBL:EHB53921.1}; Flags: Precursor;; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3382_8
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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6887..7690
DNA (804bp) protein (268aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IP36_ANADE
sigma-24 FecI-like protein
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ABC80569.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Displaying 8 items

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