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SCN18_14_9_16_R1_B_scaffold_4651

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_4651_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..699)
DNA (699bp) protein (233aa)
Aromatic-ring hydroxylase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090Y6_STIAD
aromatic-ring hydroxylase
Aromatic-ring hydroxylase {ECO:0000313|EMBL:ADO71699.1}; Monooxygenase, FAD-binding {ECO:0000313|EMBL:EAU66314.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCN18_14_9_16_R1_B_scaffold_4651_2
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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784..1743
DNA (960bp) protein (320aa)
Transcriptional regulator, LysR family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FJM1_STIAD
LysR family transcriptional regulator YnfL {ECO:0000313|EMBL:KFE69646.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
LysR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_4651_3
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2178..2474
DNA (297bp) protein (99aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBW2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:AKF87356.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
alcohol dehydrogenase
SCN18_14_9_16_R1_B_scaffold_4651_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2752..3588
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Mycobacterium orygis 112400015 RepID=M8DHI9_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EMT36226.1}; TaxID=1305739 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium orygis 112400015.;"
PE-PGRS family protein
SCN18_14_9_16_R1_B_scaffold_4651_5
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3719..4402)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SJV4_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC29070.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
SCN18_14_9_16_R1_B_scaffold_4651_6
unknown

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comp(4414..4692)
DNA (279bp) protein (93aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_4651_trna_1
unknown

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comp(4797..4869)
DNA (73bp)
transferRNA Asn
SCN18_14_9_16_R1_B_scaffold_4651_7
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4966..5619
DNA (654bp) protein (218aa)
lspA3; Signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Lipoprotein signal peptidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F322_SORC5
SCN18_14_9_16_R1_B_scaffold_4651_8
unknown

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comp(5658..5939)
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 9 items

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