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SCN18_14_9_16_R1_B_scaffold_1135

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1135_1
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(54..1520)
DNA (1467bp) protein (489aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG10_ROSCS
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ABU56397.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
chromosome condensation regulator RCC1
SCN18_14_9_16_R1_B_scaffold_1135_2
unknown

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comp(1495..2823)
DNA (1329bp) protein (443aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1135_3
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(2820..4025)
DNA (1206bp) protein (402aa)
Glucosyltransferase-I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN82_SORC5
hypothetical protein
Glucosyltransferase-I {ECO:0000313|EMBL:CAN93546.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1135_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4022..5218)
DNA (1197bp) protein (399aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2I9_PHYPA
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1135_5
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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comp(5242..6057)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ00_SORC5
Uncharacterized protein {ECO:0000313|EMBL:CAN96827.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1135_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6054..6533)
DNA (480bp) protein (160aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF85318.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
ECF family RNA polymerase sigma factor
SCN18_14_9_16_R1_B_scaffold_1135_7
unknown

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comp(6658..7269)
DNA (612bp) protein (204aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1135_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8219..9457
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PIY7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFE72509.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1135_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9512..10171)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00037E3C88
Conserved repeat domain protein {ECO:0000313|EMBL:EGK84622.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hemolysin-type calcium-binding protein
SCN18_14_9_16_R1_B_scaffold_1135_10
unknown

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10486..10698
DNA (213bp) protein (71aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1135_11
SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, Bacteroidetes, Bacteria

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comp(10850..11953)
DNA (1104bp) protein (368aa)
ccpR; cytochrome c551 peroxidase (EC:1.11.1.5)
Cytochrome c551 peroxidase {ECO:0000313|EMBL:CAN90493.1}; EC=1.11.1.5 {ECO:0000313|EMBL:CAN90493.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Cytochrome c551 peroxidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQT3_SORC5
SCN18_14_9_16_R1_B_scaffold_1135_12
SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12173..13876)
DNA (1704bp) protein (568aa)
Exported OmpA domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHP4_SORC5
exported OmpA domain-containing protein
Exported OmpA domain protein {ECO:0000313|EMBL:CAN98236.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1135_13
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13888..16509)
DNA (2622bp) protein (874aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PNV2_9DELT
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:AKF83077.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
cable pili-associated 22 kda adhesin protein
SCN18_14_9_16_R1_B_scaffold_1135_14
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

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16839..18023
DNA (1185bp) protein (395aa)
Signal recognition particle protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZ48_SORC5
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000313|EMBL:CAN98710.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 14 items

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