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SCN18_14_9_16_R1_B_scaffold_1297

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1297_1
SCNpilot_P_inoc_Paludibacter_47_17, SCNpilot_P_inoc_Paludibacter_47_17, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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122..2299
DNA (2178bp) protein (726aa)
Cyclic nucleotide-binding protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH35_ANADF
cyclic nucleotide-binding protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCN18_14_9_16_R1_B_scaffold_1297_2
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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2436..2699
DNA (264bp) protein (88aa)
Flagellar motor switch protein FliN n=2 Tax=Anaeromyxobacter RepID=B4UG26_ANASK
flagellar motor switch protein FliN
Flagellar motor switch FliN {ECO:0000313|EMBL:ABC81138.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
SCN18_14_9_16_R1_B_scaffold_1297_3
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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2696..3466
DNA (771bp) protein (257aa)
flagellar biosynthesis protein FliO
SCN18_14_9_16_R1_B_scaffold_1297_4
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3463..4209
DNA (747bp) protein (249aa)
fliP; Flagellar biosynthesis protein FliP
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:AIY40286.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
Flagellar biogenesis protein FliP id=3266919 bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
SCN18_14_9_16_R1_B_scaffold_1297_5
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4206..4475
DNA (270bp) protein (90aa)
flagellar biosynthesis n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030E31D7
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EGN75988.1}; TaxID=1036674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. A28L.;"
fliQ; flagellar biosynthetic protein FliQ
SCN18_14_9_16_R1_B_scaffold_1297_6
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4472..5251
DNA (780bp) protein (260aa)
Flagellar biosynthesis protein FliR n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HWL1_9BURK
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
flagellar biosynthesis protein FliR
SCN18_14_9_16_R1_B_scaffold_1297_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5248..6327
DNA (1080bp) protein (360aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RH38_DESPD
flagellar biosynthetic protein FlhB
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:ADW18383.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
SCN18_14_9_16_R1_B_scaffold_1297_8
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6337..7575)
DNA (1239bp) protein (413aa)
CobW n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08SL7_STIAD
cobalamin (vitamin b12) biosynthesis cobw-like protein
CobW {ECO:0000313|EMBL:EAU63472.1}; Cobalamin (Vitamin B12) biosynthesis CobW-like protein {ECO:0000313|EMBL:ADO73818.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCN18_14_9_16_R1_B_scaffold_1297_9
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7578..8279)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YEQ3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41363.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1297_10
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8296..8457)
DNA (162bp) protein (54aa)
50S ribosomal protein L33 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XI02_SORCE
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1297_11
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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9013..9462
DNA (450bp) protein (150aa)
Regulator protein, FUR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESC6_SORC5
FUR family regulator protein
Regulator protein, FUR family {ECO:0000313|EMBL:CAN97375.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1297_12
unknown

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comp(9576..10136)
DNA (561bp) protein (187aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1297_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10664..11176
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2P4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95672.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1297_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11231..11812
DNA (582bp) protein (194aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99073.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1297_15
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

11809..12594
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYF0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95612.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1297_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12596..13810
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFW9_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1297_17
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

13807..15042
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_1807 RepID=L7VWR9_9BACT
hypothetical protein
Tax=RBG_13_Chloroflexi_54_8_curated
SCN18_14_9_16_R1_B_scaffold_1297_18
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

15072..16361
DNA (1290bp) protein (430aa)
SCN18_14_9_16_R1_B_scaffold_1297_19
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16358..17743
DNA (1386bp) protein (462aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG10_ROSCS
regulator of chromosome condensation RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ABU56397.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCN18_14_9_16_R1_B_scaffold_1297_20
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18771..19649
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08152.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1297_21
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(19811..20464)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YAM4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41360.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1297_22
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

21181..23355
DNA (2175bp) protein (725aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI00036CD650
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
Displaying 22 items

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